KEGG   Sinocyclocheilus grahami: 107588829Help
Entry
107588829         CDS       T04918                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
sgh  Sinocyclocheilus grahami
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgh00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    107588829 (lig4)
Enzymes [BR:sgh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107588829 (lig4)
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     107588829 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 910 aa AA seqDB search
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSNTTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPDASKLLNYRT
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDATELYNVTTDLNKVCRQLHDPSVS
LSEVSIDLFSAFKPMLAAVANIRQIEKQMGNRTFYIETKFDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEILETVFTPIKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLDEGIMVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTFCRIGSGYTMKELYDLGLKLAKHWKLYNRNNP
PAAILCGTEKPEVYIEPCNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYQCM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVAKPKKTIAVIDHFKSQDLSAVTKE
TDMFEDVEFCVINGNDEHSKAELEKVVARCGGIVVQNPGKDTYCVIAAAQNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRDHFAKEYDRYGDSYYVDTDEQQLR
EVFERIGPTEAECSSVAQIEAENAWDDLPTSIFRPCTAYFDRCADLGDPKTIIRDTSLDT
RALEFRFHGGTVVEKLKEGISHVIVESERRTLDLKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETNYLI
NT seq 2733 nt NT seq  +upstreamnt  +downstreamnt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccgttcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagat
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcgcttcac
aaggacaattccaataccacagattcattttacgcagccatgcgtcttattgtgcctcaa
tttgaacgagagcgaatggcttacggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctgcctaaaaatggacctgacgcaagcaaactcctaaattatagaact
ccaaccacaagtcaaggagaagcaggtgactttgcccttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcatcaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacacagagttcagctttggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatccagatgcaacagaactc
tacaatgtcactacagatctgaataaagtctgccggcaacttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgcc
aacatcagacagatagagaagcaaatgggcaaccggacattctatattgagacaaagttt
gatggtgaacgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacgcaacagtttggggcctctccactagagggctccctcactccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatattggatggagagatgatggct
tataaccctacaactgagaccttcatgcagaagggcagtaagtttgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgcgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgagcctctcaagaagcgctacgaaattcttgagactgtcttcaca
ccgatcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagtg
gtgaattctctcaatgaggccattgacaatctggacgaggggattatggttaaggatccc
atgtccatctacaaaccagataaacggggcgaaggatgggtgaaaattaagcctgaatat
gtggatggtctgatggatgagcttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacagtgttccacaccttctgccgcattggatcaggctacactatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaactttacaacagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccatgcaactca
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgcttccccagaatagaaagaatcagagaagacaaagagtggtatcagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcatccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtagccaagcccaag
aagacaattgcagtcattgaccactttaaatctcaggatttatcagcggtcaccaaagag
acggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaacattccaag
gcagagcttgagaaagttgtggcccgctgtggaggcattgttgtgcagaaccctgggaaa
gacacgtactgtgtgattgcagctgcgcagaacatgagagtaaagaacctcatctcctca
gaccaacatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccctggcaaccacgtcacatgatccacatgtcaccttccaccagggaccactttgct
aaagagtatgatcggtatggagacagttattatgttgacactgatgaacaacagctgagg
gaagtctttgaaaggattggccccacagaagctgagtgttcgtctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatttttaggccttgcactgcatacttt
gaccggtgtgctgaccttggagatccaaaaaccatcatacgggacacaagtttggacaca
cgtgccttagaattccgattccatggtggtactgttgtggagaaactgaaggaaggaatc
tcgcatgtcatagtagaaagtgaaagaagaactctggacttgaagacgttgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
catgtagaggatgagactaactacttaatataa

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