Sphaerochaeta pleomorpha: SpiGrapes_3262
Help
Entry
SpiGrapes_3262 CDS
T01673
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp00061
Fatty acid biosynthesis
sgp00071
Fatty acid degradation
sgp01100
Metabolic pathways
sgp01212
Fatty acid metabolism
sgp02024
Quorum sensing
Module
sgp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SpiGrapes_3262
00071 Fatty acid degradation
SpiGrapes_3262
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SpiGrapes_3262
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgp01004
]
SpiGrapes_3262
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgp04147
]
SpiGrapes_3262
Enzymes [BR:
sgp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SpiGrapes_3262
Lipid biosynthesis proteins [BR:
sgp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SpiGrapes_3262
Exosome [BR:
sgp04147
]
Exosomal proteins
Exosomal proteins of breast milk
SpiGrapes_3262
Exosomal proteins of breast cancer cells
SpiGrapes_3262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AEV31006
UniProt:
G8QR71
LinkDB
All DBs
Position
3568930..3570741
Genome browser
AA seq
603 aa
AA seq
DB search
MSKPKVAKEKKWSFKRIKKLQRPDGLKMITVYEYTMNAVVDCSASRNSKRVALRTYGDDE
SIVTYSQLKTMKDSIGISLLENGFVHGDKIAILGESCPTWLIAYFGITGVGCVAVPVLPD
FSGKEVCSILQQCGAKGIIVNTKHFEKVIPFVKENPQFLVRMEDLFHIPDPISSQLEDKT
QFAAAPGRDITRHKMTKKALEMRAANLPKEDDLASLIYTSGTTGNSKGVMLSHKNLVWNA
DISAKHYVNFKPWQKALSILPVSHVYEFTTGQLLQIMNGMEIYYLGKAPAPSVLLPALKS
IRPTVVMTVPLLIEKVYRSAVLPVFRDNQKLKTWLKWGISRRFISRIIGRKLELTFGGKL
KFFGIGGAPLDAEVEKFLYEARFPYGIGYGLTETAPLIAGSDAKDHKIGIIGKLVEHVSV
KLDNADPVTGVGEILVKGPNVMQGYFNNPTLNAECFTEDGYFRTGDLGTLDKKNRLAIKG
RTKTMILGSGGENIYPENIEAVLNNQGFVTESLVVPEEGGLIALVKLDIDSFAQKMALDV
NDARTEAMKYLSKLREEVNKELSAFSRISSVELQDEPFQRTPTQKIKRFLYSRKPNDSTK
DKK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccaaaagtggcaaaagaaaaaaaatggtcgtttaagcgcattaagaaactg
cagagaccagatgggttgaaaatgataaccgtatatgaatatacgatgaatgcagtggtc
gattgctctgcgagtcgcaattctaaacgggtagccctcaggacctatggggatgacgag
agcatagttacctactcgcagttgaagaccatgaaggatagtattggtatttcattgctt
gaaaatggttttgtgcacggggataaaattgctatcctgggagaaagttgtccgacctgg
ttgatcgcctattttgggattaccggggtaggttgtgtcgctgttcccgtccttcctgat
ttttccggcaaggaagtctgttcgattttacagcagtgtggggcaaagggaatcattgta
aataccaagcattttgagaaagtcatcccctttgtcaaagaaaatccccaatttttggtt
cgaatggaagacttgtttcatattcctgacccgatcagttcccagctcgaggataagacg
cagtttgcagcggctcccggacgtgatattaccagacataaaatgacaaagaaagcgctg
gaaatgcgtgcggcaaaccttcccaaggaagatgacctggcttcacttatttataccagc
ggaacaaccggtaacagtaaaggggttatgctatcgcataaaaaccttgtctggaatgca
gacatttccgctaagcattatgtgaacttcaagccttggcaaaaggccctttccattctt
ccggttagccatgtgtatgagtttacaaccggtcagttattgcaaattatgaatggaatg
gagatttattatctaggcaaagcacctgccccaagcgtcctgcttccggctctcaagagc
atacggcctacggttgtgatgaccgtccctctcttgattgaaaaagtctaccgtagtgct
gtcttgcccgtgttcagggataaccaaaaactaaagacctggctgaaatggggcatttca
cgcaggtttatatctaggattatcggaaggaaacttgaattgacgttcggcggaaaacta
aaattctttggtatcggcggagctcctttggatgcggaagtcgaaaaattcctctatgag
gcccgttttccctatggtatcgggtatggattgactgagacagcccccttgatcgctggt
tccgacgccaaagaccataagatcggaataattggtaaactggtagaacatgtttcggta
aaacttgacaatgcagaccctgtgaccggggttggtgaaattctcgtcaagggacccaat
gtaatgcagggctattttaataatccaacgttgaatgcggaatgttttaccgaagacggt
tacttccgtaccggggacctgggtaccctggacaagaaaaaccgtttggcaatcaaaggc
cgtaccaagacaatgatccttggctcaggtggagagaatatttatcctgagaatatcgag
gcagtcttaaacaaccagggttttgtaacagaatccttggttgtcccggaagagggtggc
cttatcgccttggtaaagttggatatcgattcctttgcacagaaaatggctttggatgtc
aatgatgcacgtaccgaggcaatgaaatatttgtcgaaactgcgtgaagaggttaataaa
gagctcagtgctttcagtaggatcagttctgtggagttgcaggatgaacctttccagcga
actcctacccagaaaatcaaacggtttctctattcaagaaaacccaatgattctacgaag
gacaagaaatag
DBGET
integrated database retrieval system
