KEGG   Streptomyces griseus: SGR_2196Help
Entry
SGR_2196          CDS       T00691                                 

Definition
(GenBank) conserved hypothetical protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sgr  Streptomyces griseus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SGR_2196
Enzymes [BR:sgr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SGR_2196
DNA repair and recombination proteins [BR:sgr03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SGR_2196
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
Kitasato: 
UniProt: 
LinkDB All DBs
Position
2605500..2606390
Genome map
AA seq 296 aa AA seqDB search
MTPITEVEGRRVSLSNLDKVLYPATGTTKGEVLHYYAATAGGVILPHLRDRPVSFLRYPD
GPDGQVFFTKNPPPGTPAWVGTTPVPRSEDPGARQVVVRDLASLMWAANLVVEFHTPQWR
DDAPEVADRMVFDLDPGAPATVVECCTVALWLRERLAADGLTAYGKTSGSKGMHLLVPLE
PTPSGEVSAYAKRLAVEAESDLPGLALHRMKRSLRPGKVFVDFSQNAASKTTATPYTLRA
ASEPTVSAPVTWEEIAECREADALVFRAGDMAARLDRHGDLLAPLNDPEQARPLPV
NT seq 891 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcaccgaggtggaggggcgacgggtctcgctcagcaatctcgacaaggtc
ctgtatccggccaccgggacgaccaagggcgaggtgctgcactactacgcggccaccgcg
ggcggcgtgatcctgccccatctgcgtgaccgccccgtgtcgttcctgcgctacccggac
ggaccggacggccaggtcttcttcaccaagaatccgccgcccggtacgcccgcctgggtg
gggaccacccccgtgccccggagcgaggacccgggcgcccggcaggtggtcgtgcgggat
ctggcctccctgatgtgggcggccaacctggtggtggagttccacaccccgcagtggcgt
gacgacgcgccggaggtcgccgaccggatggtcttcgacctggaccccggcgcacccgcg
acggtcgtggagtgctgcacggtggcgctctggctgcgcgagcgcctggcggccgacgga
ctgacggcgtacgggaagacgtccggctccaaggggatgcacctgctggtcccgctggag
ccgaccccgtccggcgaggtgtccgcgtacgcgaagcggctggccgtggaggcggagtcg
gaccttccggggctggccctgcaccggatgaagcggtcgctgcggccgggcaaggtcttc
gtcgacttcagccagaacgccgcgtccaagacgaccgccactccctacaccctgcgcgcc
gcgtccgagcccaccgtgtcggccccggtgacctgggaggagatcgcggagtgccgggag
gcggacgccctggtgttccgggccggggacatggccgcccggctggaccggcacggtgat
ctgctcgcgcccctgaacgacccggaacaggcgcgtccgctacccgtgtga

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