KEGG   Streptomyces griseochromogenes: AVL59_07255Help
Entry
AVL59_07255       CDS       T04729                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sgs  Streptomyces griseochromogenes
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sgs00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AVL59_07255
Enzymes [BR:sgs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AVL59_07255
DNA repair and recombination proteins [BR:sgs03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AVL59_07255
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1545401..1546282)
Genome map
AA seq 293 aa AA seqDB search
MTPITEVEGQRVALSNLEKVLYPESGFTKGELLHYYATTAGVLLPHLRDRAVSFLRYPDG
PDGQVFFTKNVPPGTPEWVTTAEVARSEGPARMVVVQDLPSLVWAANLVTEFHTHQWLVG
SPDEADRLVFDLDPGAPATIVHCCEVALWLRERLAADGIEAYAKTAGSKGLHLLAAVRGS
SSERTSEYAKALAVEAERAMPRLVVHRMTRSLRPGKVFVDWSQNAGRKTTAAPYTLRARR
VPLVSTPVTWEEVGDCRAPGQLEFLAEDIAPRVQDHGDLLAGLLDPGRTAPLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgacgcctatcacagaggtggaggggcagcgggtcgcgctcagcaacctggagaaggtg
ctgtatccggagagcggcttcaccaagggggagctgctgcactactacgcgaccaccgcc
ggggtgctgctgccgcatctgcgggaccgcgccgtgtccttcctgcgctatccggacggg
ccggacggacaggtgttcttcaccaagaacgtgccgccgggcacgcccgagtgggtgacg
acggccgaggtcgcgcggtccgaggggccggcccggatggtggtcgtgcaggacctgccg
agtctggtctgggcggccaatctggtgaccgagttccacacccaccagtggctcgtcggg
tcgccggacgaggccgaccggctggtcttcgacctcgatcccggggcgcccgcgacgatc
gtccactgctgcgaggtcgccctgtggctgcgtgagcggctcgcggcggacgggatcgag
gcgtacgcgaagacggccgggtcgaaggggctgcatctgctggcggccgtgcgcgggagt
tcgtccgagcggacgagcgagtacgcgaaggcgctcgcggtcgaggccgagcgggcgatg
ccgcggctggtggtgcaccggatgacgaggagtctgaggccggggaaggtgtttgtcgac
tggagccagaacgccgggcgcaagacgaccgcggcgccctacacgctgcgcgcccgccgg
gtccccctggtctcgaccccggtgacgtgggaggaggtcggggactgccgggctccgggg
cagctggagttcctggccgaggacatcgcgccccgggtccaggaccatggagacctgctg
gcgggactgctggatcccggacggacggcgccgctcccctga

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