Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_04321
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Entry
SU5_04321 CDS
T02011
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shb03016
]
SU5_04321
Transfer RNA biogenesis [BR:
shb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SU5_04321
Prokaryotic type
Methyltransferases
SU5_04321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
AIG1
RsgA_GTPase
ABC_tran
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AFH47639
LinkDB
All DBs
Position
4719169..4720572
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AA seq
467 aa
AA seq
DB search
MTAFFIATKLRLTMSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPRYAD
YLPFKDVDGSALDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIAR
PGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLR
IYVEAAIDFPDEEIDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNA
GKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIE
RAWQEIEQADRVLFMVDGTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGIS
EVNGHSLVRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLEQGK
AQLLGAWAGELLAEELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttttttattgcaacaaagttgagactaaccatgagccataacgacactatc
gtcgcccaggcaaccccaccgggacgcggtggcgtgggtatcctgcgtatctctggtctg
aaagcgcgcgacgttgcgcaagaggtgctgggcaagctgccgaagccgcgctatgccgac
tacctgccgtttaaagacgttgacggcagcgcgctggatcagggtattgcgctgtggttc
cccggcccaaactccttcaccggtgaagatgtgctggagctacaagggcacggcggtccg
gtgatcctggacctgctgttaaaacgtatcctgacgcttccaggcgtgcgcattgcccga
cctggcgagttctccgagcgagcgttcctcaacgataagctcgatttagcccaggcggaa
gccattgccgacctgatcgatgccagttccgaacaggcggcgcgttcggcgctaaactcg
ttacagggggcattttccgcccgcgttaaccaccttgtggaagcacttactcacctgcga
atctacgtcgaagcggctatcgattttccggatgaggagatcgactttctctctgacggc
aaaattgaagcgcagctcaatggcgtcatcgccgatcttgacgccgtgcgcaccgaagcg
cgccagggcagcctgctgcgcgaagggatgaaggtagtgattgccggacgcccgaatgcc
gggaaatccagcctgctgaatgcgctggcaggccgtgaagcggccattgtcaccgatatc
gccggtaccacgcgcgacgtgttgcgcgagcatattcacatcgacgggatgccgctgcat
atcatcgataccgccggactgcgcgacgccagcgacgaagttgagcgtatcggcatcgaa
cgcgcctggcaggagattgaacaggccgatcgcgtgctgtttatggtggatggcaccacg
acggacgccgttgaccctgccgacatctggccggactttatcgcccgtctgcccaaaaat
ctaccgattaccgtggtacgtaacaaggcggatatcaccggcgaaacgttgggtattagt
gaagtaaacggtcactcactggttcgcctctcggcgcgtaccggcgaaggcgtcgacgtg
ttgcgtaaccacctcaagcagagcatggggtttgataccaatatggaaggcggcttcctg
gcccgccgccgtcacctacaggcgctggcggaagccgctgaacaccttgagcagggcaaa
gcgcagctattaggcgcatgggcgggggaactgctggcggaagagttgcgcctggcgcag
caaagcttaagcgagattaccggcgagtttacctccgacgacctgctgggacggattttc
tccagcttctgtatcggcaaataa
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integrated database retrieval system
