Shewanella sp. MR-4: Shewmr4_0995
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Entry
Shewmr4_0995 CDS
T00388
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
she
Shewanella sp. MR-4
Pathway
she03030
DNA replication
she03430
Mismatch repair
she03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
she00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewmr4_0995
03430 Mismatch repair
Shewmr4_0995
03440 Homologous recombination
Shewmr4_0995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
she03032
]
Shewmr4_0995
03400 DNA repair and recombination proteins [BR:
she03400
]
Shewmr4_0995
Enzymes [BR:
she01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shewmr4_0995
DNA replication proteins [BR:
she03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shewmr4_0995
DNA repair and recombination proteins [BR:
she03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shewmr4_0995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABI38075
LinkDB
All DBs
Position
complement(1161237..1162268)
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPDQLSRHLNPLHACYLIFGDDPWLLETSKDQIRQAAKRQGFEERVQLIQETGFNWG
DLTQEWQSMSLFSSRRIIELTLPNAKPGAEGSAALQALLQTPNPDVLLILEGPKLASEQT
NSKWFKTLDSLGIYLPCTTPEGDQFRRWLDSRIAHFKLNLQPDARAMLYTLYEGNLLAAD
QAMQLLQLLSPSQPIGADELSHYFEDQSRFTVFQLTDALLNNRQDSAQHMLAQLNGEGTA
MPILLWALFKELQLLLSLKSEQAQGAPLNSLFGKHRIWDKRKPLYQTALQRLSLIQIEHM
LAFASKLELNLKQLGHEDWTGLSHLCLLFDPKAHGHLAHISLD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttatcctgatcaactctcccgccatctcaatccgcttcacgcttgctacctg
atttttggtgatgatccttggttgctcgaaacctccaaggatcagatccgccaagcagcc
aaacgccaagggtttgaagagcgtgttcagttaattcaagaaacgggttttaactggggt
gacttgacccaagaatggcagtccatgagcctattttctagtcggcgcatcattgagcta
acactacccaacgcaaaacccggtgcagagggttcggcggcgctacaagcgttgctgcaa
acgccgaatcccgatgtgctgctgatcctcgaaggtccaaaactcgccagcgagcaaacc
aatagcaagtggttcaaaaccttggatagtttagggatttatttgccctgcactacgcca
gagggcgatcaattcagacgttggctcgactcacgcattgcgcactttaagctgaattta
cagcccgatgcgcgcgctatgctgtacacactgtacgaagggaatttactcgccgccgat
caggccatgcagttactacaactgttaagcccaagccagcctatcggtgctgacgagtta
agccattactttgaagatcaatcccgctttactgtgtttcagctcaccgatgcgctgctg
aataatcgtcaagacagtgctcagcatatgctggcccagctcaacggtgaaggcacggcc
atgccgattttactctgggccttattcaaagagctacagttactgcttagcctcaagagt
gaacaagcccaaggcgcgcccttaaatagcctgtttggtaaacatcgaatttgggataaa
cgcaaacccttgtaccaaactgcgttgcagcgcttaagcctcatccaaatcgaacatatg
cttgccttcgcgtctaagctggagctgaacctaaagcaattaggccatgaagattggaca
gggctcagccacctgtgcttattattcgatcctaaggcccacggccatttggcccatatc
agcttagattaa
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