KEGG   Shewanella halifaxensis: Shal_1077
Entry
Shal_1077         CDS       T00654                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
shl  Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:shl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shl03021]
    Shal_1077
Transcription machinery [BR:shl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Shal_1077
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Phage_antitermQ HTH_16 HTH_20
Other DBs
NCBI-ProteinID: ABZ75646
UniProt: B0TIV1
LinkDB
Position
1316312..1316890
AA seq 192 aa
MSGQISDQQLVERVQRGDKNAFNLLVQKYQNKVANLISRYVRNQADVADVSQEAFIKAYR
ALPNFRGESAFYTWLYRIAVNTAKNHLVAQGRRAPANDVDAEEAEYYDGSDALKEFASPE
RLVLSEEIQKVVFDTLDTLPEELKMAISLRELDGMSYEEIANVMDCPVGTVRSRIFRARE
AIDKKLKPLLER
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagtggacaaataagtgatcaacagttagttgagcgcgtacagcgtggagacaaaaac
gcttttaaccttttggtacagaaatatcaaaacaaggtcgcgaatctgatatctcgttac
gtacgaaatcaggccgacgttgccgatgtttcgcaggaagcttttattaaagcttaccga
gcgctaccaaactttcgtggtgaaagtgcgttttatacttggttgtaccgtattgcagtg
aatactgcgaaaaatcatctggtcgctcagggacgtcgtgccccggcgaatgatgtcgat
gctgaagaagctgaatattatgatggcagtgatgcgttaaaggagtttgcctccccagag
cgtctcgttttgtcagaagaaattcaaaaggttgttttcgacaccttagacacactgcca
gaagaattgaagatggctatttctttacgagagctcgatggtatgagttatgaagagatt
gccaatgtcatggattgccccgtcggcactgtaagatcacggatcttcagagcgcgagag
gcaatcgataaaaagcttaagccgttgctagaacgttag

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