KEGG   Shewanella halifaxensis: Shal_1857
Entry
Shal_1857         CDS       T00654                                 
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
shl  Shewanella halifaxensis
Pathway
shl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Shal_1857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shl03400]
    Shal_1857
Enzymes [BR:shl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Shal_1857
DNA repair and recombination proteins [BR:shl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Shal_1857
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C Gal4_dimer
Other DBs
NCBI-ProteinID: ABZ76422
UniProt: B0TRK4
LinkDB
Position
complement(2224949..2228722)
AA seq 1257 aa
MLYLVQSNQMEALSQLLASELRTPLPDTPLLMPEHILVQSPGMSTWLRLEIARQNNIAAG
LEFPLPSSFIWQLCHTLLDDVPKENAFTKAAMTWKLMELLPTLIDREDFLPLANYLNNGN
GEPSANDVASNSDVTSNSHDVSAETANAVSVEPEQNPLKLYQLCGQIADIFDQYLVYRPD
WIAAWEANEPRLPPKGDKLSPAQAWQPILWRALIDFNANRLNKSRYHRANLHQSLFDALD
DPNTSLDALPRRLFVFGISSMAPQTLDVLHYLAKRIDVIMLNLSPCQHYWGDIVDPRLRA
RMALQYADKQKLEVEWEDKLEVGNPLLANNGKMGRELLDLLLELPEEHTAFNFDCYQEPS
TDTMLSGVQYDILELSTRGQSLGPDAALYLSLDGRRVFEPSDNSITVRSCHSPLREVETL
HDHLLEMLSRPISDEQLADQVTPLAPKDIVIMMPDVAAYAPYIDAVFGAKQGSHFIPYAI
ADRGAAQESPLISSFLHLLKINQSRFGLTDILSILEVPAVLRRFELDDDGLAVIKRWLEQ
AGVRWGRDETSRTEYQLPAFEQNSWAFGIKRLILGYSFSDDSPLYQHSLSVNGVEGQTAQ
SLGKLLDFIEALDDVHQSLGQVCSLNERMAQLESILENFYEVDDDEMVQQQEIRDAIVKL
NEELTEAGHTTPLTIEVLQNWFNSRLSESRVGQRYLAGSVNFCTLMPMRSIPFKLVCLLG
MNDGVYPRVQHPVGFDLVAQMGPRKGDRSRRLDDRYLFLEAILSAREQLYISYIGNSERD
DSERIPSMLVSELIEYCQLVYLPKSLEGEQTSAEQASPALIDDIEKRIRAHLIHKQPLQP
FDNRLYTAPESVASRGQSPSAEQLSGQVQQSYSAQWCPAPIKPIDSLSAKAQSHYKYFIG
ESTQLLPFSDETSLDNSELELSALIRFFRNPAQYFFNRTLKVDLGLDIQADDNDEPFSLN
ALERYKLQAILLDNAIESGEQQPAAELLERLKAQGNLPLKPFDDLILNQYLHDITPLIGR
SLYLKGEHAQSVNIDLLFDELGLHLVGRIDDLSAKGLVNYRPGTANGRDLIRVYLRHLCL
CAMQQPELKQELKQELNTENNQALNRHTPITSYLLDIGHFHAFAPITAEQAKAQLSQWLS
CFKQGQAHPLMFMPRTALAYVEAEGSHRQKLLEAQSLWLDEQSQLGEGLEPHFQRLFSFP
EDFTEETFAATVNTLLSPLLSLYYKDKLSELATFVESGNDTVDLQKASSQTSQSEAN
NT seq 3774 nt   +upstreamnt  +downstreamnt
atgctatatctagtccaatctaaccaaatggaagcactgtcacagctgctagccagcgag
ctgcgtacaccattacctgatacccctttgttgatgcctgagcatattttggtacagagc
ccaggtatgtctacatggttgagactcgaaatagccaggcaaaataatattgcggcaggg
cttgagtttccattgccatcaagctttatctggcagctatgccataccttgctcgatgat
gtgcccaaggagaacgccttcaccaaagcggcaatgacttggaaactgatggagctgctg
ccaacacttatcgaccgagaagattttttacctctggcaaattacctcaataatggtaat
ggtgagccgagtgccaatgatgtggccagtaacagtgatgtgaccagtaacagtcacgat
gtgagtgcagaaaccgccaacgcagttagtgttgagccagagcaaaacccacttaagtta
tatcaactctgtggtcaaattgccgacatcttcgaccaatatttagtttatcgccccgat
tggatagcagcatgggaagcgaatgagccaagattaccaccaaagggtgacaaactcagc
ccagctcaagcttggcaacccattctatggcgagcgcttatcgactttaatgctaatcgc
ttaaacaagagccgatatcaccgtgccaacctacaccaatcactgtttgatgcattggat
gaccccaataccagtttagatgccctgcctagacggctatttgtttttgggatctcgtcg
atggcgccgcagactctcgacgtactccactatctagccaaacgcatcgatgtgatcatg
cttaacctcagtccgtgtcagcactattggggggatattgtcgacccgcgcctgcgcgca
cgtatggcactacagtacgccgataaacaaaagctagaagtggagtgggaagataagctt
gaggtcggtaacccgctcttggctaataatggcaaaatggggcgtgaattactcgactta
ctgttagagctgccagaagaacatactgcattcaattttgactgctatcaagagccgagc
accgacactatgctcagcggtgtgcaatacgatatcctcgagttaagcacccgtggccag
agtcttggtcccgatgccgcgctttatttaagcttagatggcaggcgcgttttcgaacca
agtgataactccattaccgtgcgaagctgccacagcccactcagagaagtcgaaacgctg
catgatcacttgcttgagatgttatctcgtcctatttctgatgaacaacttgcagaccag
gttacaccgctggccccaaaagatatcgtgatcatgatgcccgatgtcgcggcctacgcg
ccttacatcgatgctgtatttggcgctaaacaaggtagccactttatcccttatgcgata
gcggatcgcggcgctgcgcaagaatcgccactgatctcaagctttttgcacttactaaaa
attaaccagagccgttttggacttaccgatattctcagcattttagaagtgcctgctgtg
ctgcgtcgctttgagctagacgatgacggactggcagtgattaaacgctggctagaacaa
gcgggcgtgcgctggggccgcgatgaaaccagtcgcaccgaatatcagttgccagcattc
gagcaaaactcatgggcttttggcataaaacgcttgatcttaggttatagcttcagtgat
gactcgccgctctatcaacacagcttatcggttaatggtgttgagggacaaacagcccag
tcgctaggaaaattactcgactttatcgaagcgctcgatgatgtgcaccaatcgcttggc
caagtatgtagcttaaatgagcgtatggcgcagctagagtccatactcgaaaacttctat
gaggttgatgacgatgaaatggtacaacagcaagagatccgcgatgccatcgttaaactc
aatgaagagttaaccgaagcgggacatacaacgccattaaccatcgaagtattacagaac
tggtttaatagtcgtctgtctgaatctcgcgtaggtcagcgctatcttgccggaagcgtc
aatttctgtaccttgatgccaatgcgctcaattccgtttaaattggtatgcttactcggc
atgaacgatggcgtctacccacgagtacagcatccggttggtttcgatctggtagcgcaa
atgggaccaagaaaaggtgaccgttctcgtcgattagatgatcggtatctatttttagaa
gccattttatcggcgcgcgagcagctttacatcagctatattggtaacagcgagcgtgat
gactcagagcggatcccctcgatgttggtctctgaattaatagagtactgccaactggtt
tacctgcctaagagtttagaaggcgagcaaacatcagcggagcaagcatcccccgcctta
atcgatgatattgagaaacggatccgtgcgcatctgattcacaagcagccactgcagccg
tttgataaccgactctatactgcgccagagtctgtggctagtcgcggacaaagccctagt
gctgaacagctaagcggacaagtccagcaaagctactcggctcagtggtgcccggctcct
atcaagccgatagatagcctgtcagcgaaagcgcaaagtcactacaaatatttcattggt
gaaagtacgcagctgctaccatttagcgatgaaacgagcttggataacagcgaacttgag
ctgtcggcgctgatccgcttttttagaaatccggcgcaatatttctttaaccgcacctta
aaggtcgaccttgggcttgatattcaagccgatgataatgacgagccttttagcttaaac
gccctcgaacgctacaagctgcaagccatactgttagacaatgccatcgaaagtggtgag
cagcagcccgctgctgaattgttagagcgcttgaaagctcaaggcaacttaccgttaaag
ccctttgacgacctgatcttaaatcaatacttacatgatattacgccattaattggacga
agcttatacctaaaaggtgaacatgctcaatcggtcaatatcgatctattatttgatgag
cttggattacatctggttggccgtattgatgatttaagtgcaaaaggcttagtgaactac
cgaccgggcaccgccaatggccgcgacttaattcgcgtctatttaaggcacctttgcctt
tgtgccatgcagcagccagaacttaaacaagagcttaaacaagaactaaatacagaaaat
aatcaagcgctaaacagacacacgccaataaccagttatctactcgatattggccatttt
catgcgtttgctcccatcactgccgagcaagcaaaagcgcagttgagtcaatggttaagc
tgcttcaagcaaggccaagcacatccgctgatgtttatgccgcgtacagcgctggcctac
gtagaagctgaaggtagccacagacagaaactactcgaagcgcagtctctatggttagat
gagcagagtcagttaggtgaaggcttagagccccacttccagcgtttatttagcttccca
gaagactttactgaagagacattcgcagcaacggtaaatacgctactttcgccgttactg
agcttgtattacaaagataaactcagtgagttagccacttttgttgagtcgggtaacgac
acggtagatttacaaaaagcctcttcgcaaactagtcaaagcgaggcgaactaa

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