Shewanella halifaxensis: Shal_2065
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Entry
Shal_2065 CDS
T00654
Name
(GenBank) porin Gram-negative type
KO
K09476
outer membrane pore protein F
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shal_2065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_2065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2065
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_2065
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_2065
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
Shal_2065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
ABZ76626
UniProt:
B0TTQ8
LinkDB
All DBs
Position
2488481..2489521
Genome browser
AA seq
346 aa
AA seq
DB search
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRL
GIKGDAAINEDFTVFYQIEVGVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVF
KMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNKLQFGASYILEDNYYGEDDVR
RDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPE
VSQWAIGAEYRLSKSTRVHTELGQFDVKQYSDFDDTIMSVGFRLDF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaatagttaaattaactttactcgttgccgcggttttagcttcaccgagtgtt
atggccgatgcctataaattttatggacgtatcgattattcgattacacactctgatagt
ggtagcgcaacccatagcggtaaaagcggtactgttttagaaaacaactggagtcgctta
gggattaaaggtgatgcggcaatcaatgaagatttcactgtcttctaccaaattgaagtt
ggcgtaaatggcgcgacggaaggtaagcaaaataatccgttctctgcgcgtcctaccttt
ctaggtattaagcactctacagtcggccaacttgctgcaggtcgtatcgaccctgtattc
aaaatggcgaaaggcactgccgatgccatggatatgtactcactaaagcatgaccgcttg
tttgctggtgataaacgttggggggattcattagaatataaaaccgtaaaatggaacaag
ctacaatttggcgccagctatattctagaagataattactatggtgaagatgatgtgcgc
cgtgataacggaaactaccaggtcgctttaacctatggcgataaactattcaaaagcggt
gacttgtatctagccgctgcatacaccgatggtgtagaagacattaaaggctttcgtgca
gtcgctcagtataagattgacaagctaatgctaggctcaatttatcaaagctcagaaatc
gtgaatccaaacttagataactggcagcaacgtgatggcgatggctttatcgtgagtgct
aaatatcagtttgataagctaacattaaaggctcaatatggtcaggacgattcgggtaca
ggtaaaattgctggccgtgtttatgataaattaggcgcagcagcgactgaggttccagag
gtttcacagtgggctattggtgctgaatatcgtctttcaaaatcgactcgagtacatacg
gagcttggccaatttgacgtgaaacaatactcagattttgacgacaccatcatgagtgtt
ggttttagactcgacttctaa
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integrated database retrieval system
