Shewanella halifaxensis: Shal_2676
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Entry
Shal_2676 CDS
T00654
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2676
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_2676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_11
TPR_16
TPR_7
TPR_1
TPR_19
ANAPC3
TPR_14
TPR_6
TPR_12
TPR_8
Motif
Other DBs
NCBI-ProteinID:
ABZ77229
UniProt:
B0TL27
LinkDB
All DBs
Position
3245726..3247744
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AA seq
672 aa
AA seq
DB search
MHFLRPEWFLALIPLGLLLLFLYKSKTASSSWNHYIAPHLAKILVGGSIKKKHNNITYLA
IAWFIAVFALSGPAFEKKALPVYESAQGRVIVMDMSQSMYANDLAPNRLTQAKFKATDLI
DELPDGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPSIMPIKGSNLEAAITQAKSLL
SQGGHIRGDIILFTDGISSTQFKRAESVLKDSQYRLAIIAFGSQQGSPIKLPDGQLLRDS
ANQIVVAKTDYGLLKQLASDANGILVPSRADGSDITQITQWLASTQDTKASDLEGEVWQD
LGPYFALLLLLPALLSFRNGMIATFALFMLIQPSEQAYASTWNDLWQTQDQQAMQAYKAD
DYQAAAEQFVTPQWQASALYKAGEYEQALSAFEKDDSANGLYNQGNALMQQGKYAEAQKR
YQSALDKEPQFDAAKSNLALAKNLQQQQEQQNADQSEQQSSDEQSQQDPSQNEKSQDGQS
QQDKSQDAQSQDEKSQDKKSQDGQPSSDKSEDEQSSEQQSQEQQSQQQSEPSQQEQSQQD
QAQQGSEQQSSNQTEANNEAEMQAEPEPPTSQQPMTENAEANKAQEQDKQGEQEHSAARM
QAETDKESEQSDAESQQVAASAVPTDEPLPPEMERALRAIADDPQVLLRNKMQLEYQKRR
QQGINSKENEQW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcattttttacgtccagaatggttccttgcgctgataccattaggcctgttattactg
tttttatataaaagcaaaaccgcaagctctagctggaaccattatattgcaccacaccta
gctaaaatattagtcggtggttcaattaagaagaagcacaataatattacctatttggct
atcgcttggttcatcgctgtgtttgcattatctggcccagcatttgagaaaaaagcactg
ccagtctacgagtcggctcaagggcgtgtcatcgtcatggacatgtctcagtctatgtat
gccaatgacttagcccctaaccgcttgactcaagcaaagtttaaagcaactgaccttatc
gatgagctacctgatggtgaaacaggcttaattgcctatgctggtgatgccttcaccatt
agtccactgacgcgagataaagccacactgcttaatctattgcccacattgacccctagc
attatgcccattaagggctcaaaccttgaagctgcgatcactcaggcgaaatctttatta
agccaaggtgggcatattcgaggcgatattattttgtttactgacgggatctctagtact
caatttaagcgcgccgaatctgtactaaaagacagccaatatcggttggcaattattgcc
tttggtagccagcaaggttcaccaatcaagctgcctgatggccaactattacgggatagt
gccaatcaaattgttgtcgccaaaacagattacggcctattaaaacagttagcgagcgac
gcgaacggcatcttagtgcctagtcgagcagatggctctgatatcactcaaataacgcaa
tggctcgctagcacacaagatacaaaagccagtgatcttgagggcgaagtctggcaagac
ttgggaccttattttgccctattactgctattacctgccctgctgagttttagaaatggc
atgattgcaacgtttgctctgtttatgcttatccaaccgagtgagcaagcctatgccagt
acctggaatgacctgtggcaaacccaagatcaacaagcgatgcaggcctacaaagcagat
gactaccaagcagcagcagagcaatttgtcacccctcaatggcaggcgagtgcactgtat
aaagcaggcgaatatgagcaagctctcagcgcatttgaaaaagatgactctgccaatggc
ttatataaccaaggcaatgccttaatgcagcaagggaaatatgcagaagcgcaaaagcgc
taccagtctgcattagataaagaaccgcaatttgatgccgcaaagagtaacttagccctc
gctaaaaatctccagcagcaacaagagcaacaaaacgctgaccagtctgaacagcaatca
agtgatgagcagtcgcaacaagacccatctcaaaacgaaaagtctcaagacggtcagtcg
caacaagacaaatctcaagatgctcaatctcaagacgagaagtctcaagacaagaagtct
caagatggtcagcctagcagcgacaaatccgaagatgaacaatctagtgagcaacagtct
caagagcagcaatcacagcagcagagtgagccatctcaacaagagcagagccaacaagat
caagctcagcaaggatctgaacagcagtcctctaatcaaacagaggcaaacaatgaagca
gaaatgcaagctgaaccagagcctccaacatcacagcagcctatgacagaaaatgctgag
gcaaataaagcccaagagcaagataagcaaggtgaacaagagcactcagcagcaagaatg
caagctgagactgataaggagagcgagcagtcagacgctgaatctcagcaagtcgccgca
agcgcagtgcccaccgacgagcctttgccaccagagatggagcgggctctacgtgcaatc
gctgatgacccccaagtcttgctacgtaataaaatgcaacttgaataccagaaacgtcgc
caacaaggcatcaattctaaggaaaacgaacagtggtaa
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