Shewanella sp. MR-7: Shewmr7_3054
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Entry
Shewmr7_3054 CDS
T00389
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shm03021
]
Shewmr7_3054
Transcription machinery [BR:
shm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Shewmr7_3054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABI44038
UniProt:
Q0HS67
LinkDB
All DBs
Position
complement(3620681..3621283)
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AA seq
200 aa
AA seq
DB search
MALAIPQMHAHEHTDEQLMQRYAKGDGKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQ
ETWGRVIRAATNYEPSAKFNTWLYRIAHNLLIDHVRAVKPVDLVSHDNEEGLDTFVGAEQ
EQPDVHWQETQKSLLLKTCIALLPQVQKEAFILNIEMGFTAAVISDIAGVTLEATKSRIR
YAYQSLKDCVNAKWQEVGHE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccttggcgataccgcaaatgcatgcccatgagcataccgatgaacagttaatgcaa
cgctatgccaagggcgatggcaaagcgtttgagcagctttatcttaaacacaaaggcgcc
ttgtaccgttactttgtgcgccaactcggagacaaacagttagccgaagatttatatcag
gaaacctgggggcgggtgatccgtgccgccaccaattatgagccgagcgccaaatttaat
acttggctctatcgaatagctcataatctgttgattgaccacgtcagagccgtcaagccc
gtcgacttagtcagtcatgataatgaggaagggcttgatacctttgtaggggcggagcag
gaacaacccgatgtgcattggcaggaaacgcaaaaaagcttgttgctgaaaacttgtatt
gccctgttaccccaagtgcaaaaagaggcctttattctcaatatcgaaatgggctttacc
gctgctgtgataagcgatatcgcaggggtaacactcgaagcgaccaagagccgcattcgc
tatgcatatcaaagcttaaaagattgtgtcaatgctaaatggcaggaggttggtcatgag
taa
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