Shewanella sp. MR-7: Shewmr7_4007
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Entry
Shewmr7_4007 CDS
T00389
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
shm
Shewanella sp. MR-7
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PAS_3
GGDEF
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABI44984
UniProt:
Q0HPH1
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Position
complement(4755739..4758189)
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AA seq
816 aa
AA seq
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MLRKLSLAVLIPACMLALYLVLVTAEYFYESELVRNELADRQVSQIKQQLLRMQAVVQSA
QALQDIERIEQEVSLATLDMNVMVYILLDANSLIRFANHTVWRDSNAIEVIDGYDVVQHH
AVVQSGQASIFVNPKRLSIQAYYPVEAQYPGATELVYLESDLAPLVARASTELQQRFMRV
WGLGALLLIGFTFVLYYLLIRPFKMLSQSAKHVGTPEFSTQVPWSASEVLSLQTSLQQVH
ERLARAVKQLNDSEQRWLFAVEGSRNGIWDWDIRTGEVFLSDRWKEMIGYQPDELEGAFQ
TWESRLHPDDRQTVLDCLQEYVSGKTKEFESVHRLLHRDGHNVWVFDRGMLVDWDHLGRP
TRMIGIHVDVSESERNHAAIAELVKQSETGHRMLPEAFMLQLSQYISQRSSTGHWDALLL
LNVETHGVSNTLTSHELERLLSQLSARLSSYFAENIVVSHIELDQFAILIKELAADAKMA
GRRALALATELRHIASRPFHHADQCVNFSTNIGICLLDSIETIAPEIALRRAELAMQHAH
SLEEAGCAFYHPDLEHIQDPELSLCQQLKRAITDNQLSLMFQPVVDMQGKIVAAEVLSRW
HLANGDIIPVAKFIGLAERHGLIASLDLNVATRVCQLIKQFKQQGISLPRLTLNISTFSF
CQADFVEQLVALTRRYELDDNQLGIELTESALLTSASFIQPRISLLAEAGVAITLDNFGA
GQGALSCLRHYPLNEVKLDLHCAANLTTDTSWSQALIQSVQAFNLFIVAKGVESPQQQQL
FSRLGCTHFQGYNIARALSVNDFKQLVCPRPLLRSV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcaaactctcgctcgccgtattgatacctgcatgtatgctggcactgtattta
gtgttagtgacggctgagtatttttatgagagtgagttggtgcgaaatgaattagctgac
cgccaagtcagccagatcaagcagcagttattacgtatgcaagccgtggtgcaatcggcg
caagcattacaagacatagaacggatcgagcaggaagtctctctggcgaccttggatatg
aacgtcatggtttatatcttactggacgccaatagcctgatccgctttgcaaatcataca
gtttggcgtgatagcaatgccattgaagtcatcgatggatatgatgtggttcagcatcat
gcggtggtgcaatccggtcaagcaagtatttttgttaatcctaaaaggttgtctattcaa
gcttattatcctgtggaagctcaatatcccggcgccacagagctggtctatctcgagtca
gatttagcccctctggttgcgcgagcttctaccgagttacagcaaagatttatgcgtgtc
tgggggcttggggcgctgctgctaatcggttttacctttgttttatattatctgctgatc
cgcccatttaagatgttgagtcaatcagccaaacacgttggaactcccgagttttcaact
caagtgccttggagcgcgtccgaggttttatccctacagacgagtctgcagcaggttcat
gagcgcttagcgcgagccgtcaagcagctaaatgacagtgagcaacgttggttgtttgcg
gtcgaaggctcgcgtaacggtatttgggattgggatattcggactggtgaggtgtttttg
tctgatcgctggaaggaaatgatcggctatcagcccgacgaactcgaaggtgcattccag
acttgggagagccgtttgcatcccgatgatagacaaaccgtgttggactgtctgcaggaa
tacgtcagcggcaagacaaaagaatttgagagtgtgcatcgtttactgcatcgcgatggc
cataatgtctgggtattcgaccgtggcatgttggttgattgggatcatctcggtcgcccc
actcgcatgattggtattcatgtggatgtgtctgagagtgagcgaaaccatgccgcgatc
gccgagttggttaagcaatctgagacaggccataggatgctccccgaagcctttatgctg
cagttgtcccaatatattagccagcgaagcagcactggtcactgggacgccttgttatta
cttaacgttgaaactcatggtgttagtaatacgctaacctcccatgagcttgaacgatta
ttatcgcaactgagtgcgaggctctcgagttattttgctgaaaatattgtggtatcccat
atagagcttgatcagtttgcaattttgatcaaagagttggcggctgacgctaagatggct
ggtcggcgcgcattggcactcgcgactgagttaaggcatatagcatcgcgtccatttcat
catgctgaccagtgtgtcaacttcagcaccaatattggtatttgcttattggattcgatt
gaaacgatcgcgcctgagattgcactgcgccgcgccgaattagcgatgcaacatgctcac
tcgctcgaggaggccggctgtgccttctatcatcctgatttagaacatattcaagatcct
gaattgtcgttatgccagcaactaaagcgtgctattacagacaatcagttgtcattgatg
ttccagcccgttgtggatatgcaaggaaagatagtcgctgccgaagtcttatcccgttgg
catttagccaacggtgatattatccccgtcgctaagtttattggcctcgccgagcgccat
ggtctgattgcatcactcgatttaaatgtggctacgcgcgtttgccagttgattaaacaa
tttaaacagcagggcattagcctgccacgtttaactttgaatatcagtaccttctctttc
tgccaagctgatttcgtcgagcaattagttgcgttaacccgtcgctacgagctggatgac
aatcagctgggtattgagttaaccgagagtgcattactaacatcagcctcctttattcag
ccgaggatcagtctgctcgcggaagctggagttgcgataacattagataactttggtgcg
ggacagggcgccttgagttgcttgcgtcactatcccttgaatgaggtgaagctcgattta
cattgtgccgctaacttaacgactgatacgagctggagccaagcgctgattcagtcggta
caagcctttaacttgtttattgtggccaaaggcgtcgaatcaccgcagcaacagcaactc
tttagccgcttaggttgtacccatttccaaggctacaatattgcgcgtgccttaagtgtt
aatgactttaaacagcttgtttgtccacgtcccttgttgcgtagcgtttaa
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