Shewanella sp. ANA-3: Shewana3_0133
Help
Entry
Shewana3_0133 CDS
T00428
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
shn
Shewanella sp. ANA-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
NIT
PAS
PAS_3
PAS_4
PAS_8
CHASE3
HAMP
Motif
Other DBs
NCBI-ProteinID:
ABK46377
UniProt:
A0KRF8
LinkDB
All DBs
Position
complement(148465..151698)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPSTLQHLSLKQKLILFSLLPLLMMSIFVLSRMYVLVKEYRSANQNHLAIQATAQTTELL
YQLHNEYGLSVQLSAPGSPQEETRLLQQQQITSDALDTLLNGSALSALMSALGRNQLAAA
QLQEQLNTLTLLSHRLASGHQEALDQHPKAFIDLYNQFNTELVKLIQQLQLQTNDIAQSR
AYTDLLNLLMVQQLAVKERSAINRMLLSQTLNINDYRAISTIMYEYGQAIEHASNASISD
RQSLIRKVQTSPENLRILKISQQIEQQIRVSTLVQNINAHLGYGGLIDSFQDYLIKGDAA
SLEKFTKAQAIIQLNLDELNHEIRNIPELKAAVRTIEDSVDQYQFCMSKLQQLKQQQLSL
EEITALAQVNDSGLSEAIDKLLMPPHPVSSKHWWSLTSDRINKLHAISDEITEKMAHQSE
VEQTKSLSLLGLYLFSAIFTAAITLWLGRKIIRSFMVKITKIANDMQQMAADPQLNINID
ASGTDELARMAQAMNRMISERQKANHALSRAAAVFNYSAEGIMVTDADNHIELINPAFSQ
ITGYSLEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGKWEGEIWNKRKDGQVYPEYLAI
TVVRNEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTGLPNRKLFNERLQHEIQLAQ
HDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDFVARIGGDEFVLI
LPRVTNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMA
MYQAKDAGRNNFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICSV
EALIRWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAINV
SSRQCINTRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCLSTLESIRHLGSQ
IYIDDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIVMMGQSLEMELVA
EGIETEAQWQFLRDLGCHYAQGYLLSKPLPFDEITPLLGQTLPKMLHLEQREKCVNS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccatccacgctacagcatctcagcctgaagcagaagttgattctgttttcactgcta
cctttgctgatgatgagtatttttgtgttgtcgcggatgtatgtgctggtgaaggaatat
cgctccgccaatcagaaccatctggcaatccaagcgaccgcccaaaccaccgaactactc
taccaactgcataacgaatacggcctcagcgtccagctttctgcccccggttccccccaa
gaagaaacacgcctgctacagcaacaacagataacctcagacgccttagataccctgctc
aatggctcagccttaagcgctttaatgtctgccttgggtcgcaatcaactcgccgccgcg
cagttgcaggagcagctcaataccctaaccctgttaagtcataggctagcatcggggcac
caagaggcactcgaccaacatcctaaggcctttatcgatttgtataaccagttcaacacg
gaattggtcaaacttatccagcaattacagttacaaaccaacgatattgcgcaatctcgc
gcctacacggatttgcttaacttattgatggtgcaacaactggcggtaaaagagcgtagt
gcgattaatcgaatgctgctgtcgcaaacgctgaacattaacgactaccgcgcgatcagc
actatcatgtatgaatatggccaagccatagaacatgccagcaacgcctcgatttctgac
cgtcagtccttaatccgcaaggtgcaaacctcccccgagaatctgcgcatcctcaagatt
agccaacaaatagagcaacaaatccgcgtcagtaccttagtgcaaaatattaatgctcat
ttaggctacggtggcttgattgacagttttcaggattacctcatcaagggcgatgctgcc
tcgctagagaaatttactaaggcgcaggcaattatccagctgaatctcgatgaactaaat
catgaaatccgcaatattcccgagctcaaagcggcggtcaggacgattgaagacagtgtc
gatcaatatcaattctgcatgtctaaactgcaacagttgaagcaacagcaactgtcactc
gaagaaatcaccgccctcgcccaagtcaatgatagcggtctgagcgaggccatagacaag
ctgttaatgccaccgcatcccgtcagcagtaagcactggtggtcactcaccagcgatagg
atcaataagttgcacgccatcagtgatgaaatcaccgaaaaaatggcgcatcagagtgag
gttgagcagactaagtcactcagtttgctcgggttatatctattctccgcgatttttacc
gcggcaattaccctctggctcgggcgcaaaatcatccgcagctttatggtcaaaatcact
aagattgccaatgatatgcagcaaatggccgccgatccgcagctcaatatcaatatcgat
gcctctggcaccgacgagctggcccgcatggcacaagccatgaatcggatgatcagcgag
cgccaaaaggccaaccatgccctaagccgcgccgccgccgtatttaactattccgccgaa
ggcattatggtcacggatgccgataaccatatcgagttgattaacccggcctttagccag
atcaccggctatagcctcgaagaggtgaagggccgcagcccctcgattttaagctcgaat
cgccacccgcatcattactacaccgccatgtgggaagcgctgcataaagagggcaaatgg
gaaggcgaaatctggaataaacgcaaagatggccaagtgtatcccgagtacctcgccatt
actgtggtgcgtaatgaacagggcgaaataatccaacatattggtttatttatggatatc
agtaagcgcaagcaatacgaacaagacctctggtatcaggcaaacttcgacaccttaaca
ggtctccccaaccgtaagttgtttaacgagcgcctgcagcatgaaatccaactcgcccaa
cacgactcccgtaagctggcgattctgctgatcgacctagaccaattcaaatatatcaat
gatgtgcagggccatgcgacgggcgatctcctgttgcaagacgtggctaagcggcttgaa
aatattgccggtaagaacgactttgtcgcccgcatcggtggcgacgaatttgtgcttatt
ctcccccgcgttaccaatgagttcgcgattgagcatatggcgagccggatcattgaaacc
ttagccacgccctttaacttaaatgagcgggaaatccagatctcggccagcttcggcatc
ggcgtctaccccgaggacgggctagatgtgagttcgctgacccgcaataccgagatggcc
atgtatcaggccaaagatgctgggcgtaataactttaagtactttacctccggcatgaat
caagccatgtttgcccgcatggagctggaacaacgactgcgccgcgccgtggcacaggat
gaatttaccctcttttatcaaccgattgtcgatatgaagacgggacaaatctgcagcgtt
gaggcactgatccgctggcaagatcccgacttaggactgatcccaccagaccaatttatc
gctatcgccgaggagacagggcttatcgaacctatgggcgaatgggtgctcaaccaagcc
atgcacgatttaagacaatggcagcatatgggactcaacctgaatgtcgccatcaatgtt
tctagccgtcagtgcattaatacccgtggtatcggcttcgaccaagtgttacaggaatgc
tttaaccgtcaccatatcaatcctagaaacgtgcatatcgagatcaccgagagcatgctg
atgggcgatgccagccactgcttaagcaccctcgaatcaatccgccacttaggctcgcag
atttatatcgatgactttggcactggctattcatcattgagttatttgaagaaattccca
atttcggtcatcaagattgaccgcagctttgtcgagcacgccctcgaaaactgttctaac
gccaatctggtcaaggccattgtgatgatggggcaaagtcttgagatggaacttgtcgcc
gaaggaatcgaaaccgaggcccaatggcagtttttgcgtgacttaggctgccactatgca
caaggctatttactttcgaaaccgctgccattcgatgaaataaccccattactcggccag
accttgccgaaaatgttgcatttagagcagcgagagaaatgcgtaaacagttga
DBGET
integrated database retrieval system
