Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_7702
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Entry
SHJGH_7702 CDS
T02531
Name
(GenBank) Type IV secretory pathway VirD4 protein-like protein
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
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Gene cluster
GFIT
Motif
Pfam:
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AGF67364
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Position
8740572..8742392
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AA seq
606 aa
AA seq
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MMPKAAVPKTAVRLRMGRDAIWVIPLIVAFTLTALLWASAVLSGLLQQGRPAAVGWNAAG
NGILAILSHPGEPATVWPHAGVGGPIAFWSSFTVLLVASGCGAWKGYSWWKRRGVDGADG
MATVAQLEKAMGEKQALARASSLRPTMYEKDPSSITIRHVAVHIGNANPSHIPLWITIEE
SVVLVAPPREGKTSQIILPGILDFQGTVLATSSKTDVLYNTAVLRKEHGPVWVLDPTGLS
GWPNQLRWPLTAGCERYQVARKRAETLVATTKSEEGTSNGGYFSLNAKTLITCWLHAAAL
NRRPVSDVLSWAADPDNREAVDLLALQGKHALAEALAGQHAAAEEERSATWRTAQQSFIA
LYDDNVAAIFAPEGDAEVFDIEKYLTEGGTLFLIGEDEEGSALAPLNAAFAKALFDTAKA
IAGRAPNGRLPIPLGCFLDELANVAPLPEIPSLMSVSGSQNIFVMAVLQSYAQAEERWGQ
LGVRKMMAAGTVKIFLGGISDPEELKAYSALAGEFDEDVASISDDGDRVSVSTSLRRRAV
LEPADIRMIPERGGLVFHRRTPATLVSFTRAHEGPRAEEIKAATRKAREIVAGRPLTLDK
AGRVDG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaaggccgccgtcccgaagaccgccgtacggctgcggatgggccgcgacgcc
atctgggtcatccctctgatcgtcgcgttcacgctgaccgcgctgctgtgggcctcggcg
gtgctctccgggctgctgcagcagggccggcccgcggcggtcggctggaacgccgccggg
aacggcattctggcgatcctttcgcaccccggcgaaccggccaccgtctggccccacgcc
ggcgtcggcgggccgatcgccttctggagctccttcaccgttctgctggtcgcctccggc
tgcggggcgtggaagggctactcgtggtggaagcggcgcggcgtcgacggtgccgacggc
atggccactgttgcacagctggaaaaggccatgggggagaagcaggccttggctcgggct
tcctccctgcgacccaccatgtacgagaaggacccgagctcgatcaccatccggcacgtc
gccgtgcatatcggcaacgccaacccctcacacatcccgttgtggatcacgatcgaggag
agcgtggtcctggttgcgcctcctcgggagggcaagacgagccagatcatcctcccgggc
atcctcgacttccagggcacggtgttggccaccagctccaagaccgacgtgctgtacaac
acggcggtgctgcgcaaggaacacggcccggtgtgggttctcgacccgacggggctgtcc
ggttggccgaaccagttgcggtggccgctgaccgccgggtgtgagcgctaccaggtcgcc
cgcaagcgggccgagacgctcgtcgccacgaccaagagcgaggagggcacctccaatgga
ggttacttctctctcaacgccaagacgttgatcacctgctggttgcacgccgccgcgctg
aacaggcgtccggtgtccgatgtgctgagctgggcggccgatccggacaaccgggaggcc
gtcgacctgctcgcgctccagggcaagcatgccttggctgaggccctggccggccagcat
gccgccgcggaagaggagcgcagcgcgacctggcgaacagcccagcagtcgttcatcgcc
ctgtatgacgacaacgtcgccgccatcttcgcccccgagggcgacgcggaggtcttcgac
atcgagaagtacctcaccgagggcggcacactgtttctgatcggcgaggatgaagaaggc
tcggcgctcgcgccactgaacgccgcattcgccaaggcgttgttcgacacggccaaggcg
atcgcagggcgcgcccccaacgggcggttgcccatccctctgggttgcttcctggacgaa
ctggccaacgtcgccccgctgccggaaatcccgagcctgatgagcgtctccggctcccag
aacatcttcgtcatggccgtcctgcagtcctatgcccaggcggaggagcggtggggacag
ctcggcgtacgcaagatgatggcggctggcaccgtgaagatcttcctcggtggtatctcg
gaccccgaagagctcaaggcgtactccgcgctggcgggagagttcgacgaggacgtcgcc
tcgatctctgacgacggagaccgcgtgtcggtctccacttcgctgcgacgccgcgcggtg
ctggagccggccgacattcgcatgatccccgaacgaggcggcctggttttccaccgtcgc
accccggcgactcttgtcagcttcacccgtgcccacgaaggaccgcgggccgaggaaatc
aaggccgccactcgcaaggcacgcgagatcgtcgcgggccgacctctgacgttggacaag
gcgggccgcgtcgatggctaa
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