Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_8482
Help
Entry
SHJGH_8482 CDS
T02531
Name
(GenBank) IS4 family transposase
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AGF68144
LinkDB
All DBs
Position
complement(9664168..9665544)
Genome browser
AA seq
458 aa
AA seq
DB search
MKHSIGSYPRVRVQDDGRQVVSRAGAVLLVETVRKTGLEQVISTAPAPWRKPRAVHDPGK
VLLDVALAVALGGDCLADVAVLRAEPAVFGPVASDPTVSRLIDALAASGEKALRAIRSAR
SEVRDSVWSLAGENAPDTGGQVVVDLDGVLVIAHSDKEDAAATWKKTYGHHPLTAFVDHG
PGGTGEPVAALLRPGNAGSNTAADHITTAQLALAQLPKRYRRGRQTLIRTDSAGGTHAFV
SWLARQGRWLSCSVGMTVTEAIHEHVLKVPASAWTAAVETNGEVRDGAWVAELTGKLLDD
WAKGMRLIVRKERPHPGAQLRITDADGMRITCFATSTAGRPIAELELRHRLRARAEDRIR
AARATGLRNLPLHTTAQNKVWLEIVQIALDLLAWMPMLALTGTARLWEPRRLRFRLFTAA
GQLVTTGRRRILRLARHWPWTGHITAALERLALLPNPG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcactctatcgggtcctatcctcgtgtccgcgtccaggacgacggtcgccaggtc
gtctcccgggctggggcggtcctgctcgtcgaaacggtccgcaagaccggtcttgagcag
gtcatatcgacagcgccggcgccgtggcgcaagccgcgggccgtgcacgatcccggcaag
gtcctcctggatgtcgccctggcggtcgcactgggcggggactgcctcgcggatgtcgcc
gtgctgcgggccgagccagccgtcttcggtccggtcgcctccgacccgaccgtctcccgc
ctgatcgacgccctcgccgcctccggcgagaaagcgttgcgcgcgatccggtccgcacgc
tccgaagtccgcgacagtgtctggtcgttggccggtgagaacgccccggacaccggcggg
caggtcgtcgtcgatcttgacggcgtcctcgtgatcgcgcactccgacaaggaggacgcg
gccgcgacctggaagaagacctacggccaccatccgctgacggccttcgtcgaccacggc
ccgggcggaaccggcgagccggtcgccgccctcctcaggcccggcaacgcgggctcgaac
acagcggccgaccacatcaccaccgcccagctcgccctggcccagctgcccaagcgctac
cggcgagggcggcagacgctgatccgcacggactccgccggcggcacccacgccttcgtg
tcctggctcgcccggcaaggacgatggctgtcctgctcggtcggaatgacggtcacagag
gcgatccacgagcacgtgctgaaggtccccgcatcggcctggacggcggccgtcgagacc
aatggtgaggtccgtgacggggcctgggtcgccgagctcaccggcaagctcctggacgac
tgggccaagggcatgcggctgatcgtccggaaggaacggccccatcccggcgcccagttg
aggatcacggacgcggacggcatgcggatcacgtgcttcgcgaccagcacagccggtcgg
ccgatcgccgaacttgagctccgtcaccggctacgggcccgggcggaggacaggatccgg
gccgcccgggccaccggcctgcgcaacctgcccctccacaccacagcccagaacaaggtc
tggctcgagatcgtccagatcgctctcgacctgctggcctggatgcccatgctcgccctc
accggcacggcccgcctctgggaaccccgccgcctgcgcttccgcctgttcaccgcggcc
ggacaactcgtcaccaccggccgtcggcggatcctccgcctggcccggcactggccctgg
accggccacatcaccgccgcactcgaacggctcgcactcctgccgaatcccggctga
DBGET
integrated database retrieval system
