Shewanella putrefaciens 200: Sput200_2978
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Entry
Sput200_2978 CDS
T02015
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shp03021
]
Sput200_2978
03009 Ribosome biogenesis [BR:
shp03009
]
Sput200_2978
Transcription machinery [BR:
shp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sput200_2978
Ribosome biogenesis [BR:
shp03009
]
Prokaryotic type
rRNA transcription factors
Sput200_2978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF2187
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADV55380
UniProt:
E6XJ87
LinkDB
All DBs
Position
complement(3373862..3375361)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYDGDIDVRVAIDRKTGGYETFR
RWMVIDDHGEALENPFREITLEAARYENPDIQPGEFIEDDIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFRDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLSRTKPEMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVV
SLFINSLDVDEDFAQVLANEGFTSLEEVAYVPVSELLAIDGFDEDLVEALRERAKAAIST
RALASEEALDGVEPSDELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGTLIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgctgaagcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagagatcgctctggctactgcaaccaagaaaaaatacgat
ggcgatattgatgtccgcgttgcgattgaccgcaaaacgggtggctatgagacattccgc
cgttggatggtcattgatgatcacggtgaagccttagaaaacccatttcgcgagattacg
cttgaggcggctcgttatgaaaatccggatattcaaccgggtgagtttatcgaagacgat
atcgagtctgttgtatttgaccgcattacgactcaaaccgccaaacaagtgatcgtacaa
aaggtacgtgaagctgaacgtgctcaagtggttgagcagttcagagataaagaaggtgaa
ctgatcactggcgttgtgaaaaaagcaacccgtgaaagtgtcgtggtcgatttaggcaat
aatgctgatggcgtgctgttccgtgaagatttaatttcacgcgaatctttccgtcctggt
gaccgtgtgcgtgcattattgtactcagtacgtccagaagctcgcggtgcacaattattc
ctaagccgtactaaacccgaaatgctgattgagcttttccgtgttgaagtacctgaaatc
gctgatgaattgatcgaagtcatgggcgcagcccgtgatccaggcgcacgcgctaagatc
gcggttaagtcgaatgatcgccgtatcgatcctatcggtgcgtgtgttggcatgcgcggc
gcacgtgtacaagcagtatcaaatgaactgggtggcgagcgtgttgatatcgtattgtgg
gatgataatccagcacaatatgtgatcaatgccatggcgccagctgatgtagcttctatc
atcgtcgacgaagataatcattcaatggatatcgcggttgaggctgatagtttggcacaa
gccattggacgtaatggccagaacgtacgtttagcaactcaacttacgggttgggaactg
aacgtaatgacagtggaagacatgaataagaaacatcaggctgaaagtgccaaagtggtg
agtctgtttattaattcactggatgtcgatgaagattttgcacaagtactagcgaatgag
ggctttacgtcgcttgaagaggtcgcttatgtacctgtgtctgaattattggcgatagac
ggtttcgacgaggatctcgttgaagctttacgtgaacgtgcaaaagctgcgatctcgaca
agagcgctcgcatctgaagaagcactggatggtgtggagccaagtgatgagttgttagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtattgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtacgctcatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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