Sarcophilus harrisii (Tasmanian devil): 100914787
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Entry
100914787 CDS
T02286
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100914787 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100914787 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100914787 (THOC1)
03041 Spliceosome [BR:
shr03041
]
100914787 (THOC1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100914787 (THOC1)
Spliceosome [BR:
shr03041
]
Complex C
Other components
EJC/TREX
100914787 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100914787 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
100914787
NCBI-ProteinID:
XP_003760061
Ensembl:
ENSSHAG00000014829
UniProt:
G3WPU7
LinkDB
All DBs
Position
1:complement(494343016..494394966)
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AA seq
658 aa
AA seq
DB search
MSPSPPLFSLPEARTRFTNSTRDALINKNIKPLLSTFSQLAGSENEKKCTLDQAFRVILE
EEIITRASCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHIEDRDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPSDSKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENNESPDVRLDKPVTGDQIDLYANKLGEQWKILAPYLEMKDSDI
RQIESDSEDVKMRAKQLLVAWQDQEGIHATPENLINALNKSGLSDLAESLTNDTETSS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtcgccgcctctcttcagtttgcccgaagcgcggacccggtttacgaattct
accagagacgccttgatcaacaaaaatatcaagccattattgagcaccttcagccaatta
gctggcagtgaaaatgagaaaaaatgtacccttgatcaagctttcagagttattctagag
gaggaaattataacccgtgcatcatgtgaaaatgttttggctattatttctcttgctatt
gggggagtcactgaaggtatttgtacagcatctacaccttttgtactattgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatcttcacctttgtggagaaaaatgtt
gccacttggaaatcaaatacattctattctgctggaaaaaactatttgttgcgtatgtgc
aatgatctccttagaagattatcaaagtcccagaatactgtgttctgtggaaggattcag
cttttcttggccagactttttccattgtcagagaaatcaggtcttaacttacaaagtcag
tttaatcttgaaaatgtcactgttttcaacacaaatgaacaagagagcactttgggtcag
aagcacattgaagatagagatgaaggaatggaagtagaggaaggagaaatgggagatgat
gaagcgccaacaagttgttccattccaattgattacaacttgtatagaaaattctggtca
cttcaggattacttcagaaatcctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaggaggttttagctgtttttaaaagttataaactggatgatactcag
gcctcaagaaagaagttagaagaattgaaaactggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagcttatggatctacaactgagtgatagtaactttcgccgtcac
atccttctgcagtatctcattttatttcaatacctcaaggggcaagtaaaattcaaaagt
tcaaactatgttctaactgatgagcaatccctgtggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccctgatggagagagattttcaaaaatggtagagcat
atattaaacacagaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaccttcagactccaagcctacaagagtcgtaaggaaaagaacagcaccggag
gatttcctggggaaaggacccaacaaaaaaattctgatgggaaatgaagaattaacaagg
ctttggaatctctgtcctgataatatggaagcttgtaaatcggagtccagggaatacatg
ccaactttggaagaattttttgaagaagccattgagcaggcagatccagagaatatggtt
gaaaatgaatataaggctgtgaataactccaattatggatggagagctctgaggctgtta
gcacgtcgtagtccacacttcttccaaccaaccaaccagcagtttaaaagtttgccagaa
tatctagaaaatatggttataaaactagccaaggagttgccacctccttctgaagaaata
aaaacaggtgaagatgaagatgaggaagataatgatgctttattgaaggaaaataatgag
agtcctgatgttcggcttgacaaacctgtaacaggagaccaaatagatctgtatgccaac
aagctgggagaacaatggaaaatactggctccatacttagaaatgaaagactctgatata
agacagattgagtctgacagtgaggatgtgaagatgagagctaagcagttgctagttgca
tggcaggatcaagagggaatacatgcaacacctgagaatctcataaatgcattaaataaa
tctggattaagcgaccttgcagaaagtctaactaatgacactgaaacaagtagttaa
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