Sarcophilus harrisii (Tasmanian devil): 100915929
Help
Entry
100915929 CDS
T02286
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03022
Basal transcription factors
shr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100915929 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
100915929 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100915929 (ERCC3)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100915929 (ERCC3)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100915929 (ERCC3)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100915929 (ERCC3)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100915929 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
100915929
NCBI-ProteinID:
XP_003763813
Ensembl:
ENSSHAG00000007423
UniProt:
G3VZG5
LinkDB
All DBs
Position
3:320216166..320256731
Genome browser
AA seq
783 aa
AA seq
DB search
MGKKDKSDRDKKKSKKRHFEEEDDDEDDAPGNESQEAVPSAAGKQVDESGTKLDEYGAKD
YRIQMPLKDDHASRPLWVAPDGHVFLEAFSPVYKYAQDFLVAIAEPVCRPSHVHEYKLTA
YSLYAAVSVGLQTSDITEYLKKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIKELLQDQVIRECRLRNAEGEETELITETFTSKSAISKTSEGASGPSTSQGTDGQN
KTDVPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSSKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSKSTQVSRRFGSMSSMSGADDTVYMEYHSSRSKPSVNKHVHPLFKR
FRK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggataaatccgaccgcgataaaaagaagtccaagaaaagacactttgaa
gaagaagatgacgacgaagatgatgctcctgggaatgaatctcaggaagcagttccatca
gcagctgggaagcaagtagatgaatcagggaccaaattggatgaatatggggctaaggac
tacaggattcagatgccactgaaagatgaccatgcctcccgcccactctgggtggctcct
gatggccatgttttcctagaagccttctctcctgtttacaaatatgcccaggacttccta
gtggctattgctgagcctgtatgtagaccaagccatgtgcatgaatacaaactcactgct
tattccttatatgctgctgttagtgttggactacagacaagtgacatcactgaatatctc
aaaaagctcagcaagactggtgttccagatggaatcatgcagtttattaagttgtgtact
gtaagctatggaaaagtcaagctcgtgctgaaacacaacaggtattttgttgaaagctct
cacccagatgtcattaaagagcttctccaggaccaggtgattagagaatgccgcctgagg
aatgctgagggggaagaaactgagctcatcactgagaccttcacaagtaaatctgctatt
tccaaaaccagtgaaggggccagtggaccctccacatcacaaggaacagatggtcagaat
aaaacagatgtccccgcagacttgtttgagttttatgaacaaatggacaaggatgaggaa
gaagaggaagaaacacagactgtatcttttgaagtgaagcaggaaatgattgaggagctc
cagaagcgctgcatccatctggaatacccattgctggctgaatatgatttccggaatgat
tctgtcaaccctgacatcaatatagacctgaaacccacagctgtcctcaggccctatcag
gagaagagccttcggaaaatgtttgggaatggacgggcccggtcaggggtcattgtcctc
ccttgtggagctgggaaatctttggtgggtgtgacagctgcatgcactgtccgaaaaagg
tgcctggtacttggcaactcagctgtgtctgtggagcaatggaaagctcagttcaagatg
tggtctaccattgatgacagtcagatctgccggttcacttcagatgccaaagataagccc
attgggtgctcaatcgccattagtacctactcaatgctgggccacaccaccaagagatcc
tgggaggctgagcgagtcatggagtggctcaagactcaggaatgggggcttatgatccta
gacgaagtacataccatacctgccaaaatgtttcgacgagtcctcaccattgtacaggct
cactgcaagttgggtttgactgcgaccctcgtccgagaagatgacaaaattgtggacttg
aatttcttaattggacccaaactatatgaagccaattggatggaacttcagaataatggc
tatattgccaaagtccagtgtgctgaggtttggtgcccaatgtctcctgaattttatagg
gaatatgtggcaatcaagactaagaagcggatattattatacaccatgaaccccaacaaa
ttcagagcctgccagtttctgatcaaattccatgaacgcaggaatgacaagatcatcgtt
tttgcagacaatgtctttgccctgaaggaatatgctatccggctgaacaaaccctatatc
tatggtcctacatcacaaggtgaaaggatgcagattttacagaatttcaagcataatcca
aagataaacactatcttcatatccaaagtaggagacacatcatttgatctgcctgaagca
aacgttctaattcagatatcttctcatggcggctcccgaagacaggaggcacaaaggttg
ggacgagtacttcgagccaagaaagggatggttgcagaggagtataatgccttcttttac
tcactggtatcacaggatacacaagaaatggcatattcaacaaaaaggcagaggtttctg
gtcgatcaaggttatagcttcaaggtaattacaaagcttgctggtatggaagaagaagaa
ttagcattttcatcaaaagaggagcagcaacagcttttacagaaggtcctggcagccact
gacttggatgctgaagaagaggtggtagcaggagaatttggctccaaatccactcaggta
tcccgtcgttttggatcaatgagttccatgtcaggggcagatgatactgtctatatggaa
taccattcttctcgaagcaaaccatctgtaaataagcatgtccatccccttttcaaacgt
ttcagaaaatga
DBGET
integrated database retrieval system
