Sarcophilus harrisii (Tasmanian devil): 100920915
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Entry
100920915 CDS
T02286
Symbol
HCFC2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100920915 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100920915 (HCFC2)
03029 Mitochondrial biogenesis [BR:
shr03029
]
100920915 (HCFC2)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
100920915 (HCFC2)
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100920915 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
100920915
NCBI-ProteinID:
XP_031796841
Ensembl:
ENSSHAG00000005177
LinkDB
All DBs
Position
5:complement(21710314..21740511)
Genome browser
AA seq
799 aa
AA seq
DB search
MAAPSLLNWRRVSSFTGQVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTVTNQWF
LPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKIKPRPPAT
GLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNSNVPRYLNDFYELELQHGSGVVGWSIP
VTKGVVPSPRESHTAVIYCRKDSGTPKMYIFGGMCGSRLDDLWQLDLETMSWSQPETKGT
VPLPRSLHTANVIGNKMYVFGGWVPQTTNNVEASQDSEWRCTSSFSYLNLDTAEWTSLVS
DSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKSMNNQVCCKDLWYLDTEKPPAPS
QVQVIKATTNSFQVKWDEVPTVEGYLLQLNTDLPYQAASPDAHANLQGVQADLSRQASNN
TLPHNMPVSHLSQELLKLEDTGNSTESDHKVRKGIAIKSQSDHKEFERHVPSIPPFALAT
HVADGSCSVDMRKKNEGAQTSKNVSESYGLDLRTVHPEAAVSSAISGTHTMVPQRIIKTE
STNTNGAVVKDETSLTAFSGKSEADEAFVQPVTKGSSAETQDSAAPLSKDTTSKPMTLER
KGERQWCDVGIFKSNTALVNQFYLLPKGKQDISKVGNTDAPDYSLLKQQDLVPGTVYRFR
IAAINGCGIGPFSKISEFKTCIPGFPGAPCAVRISKNVDCIHLSWEPPASPSGNILEYSA
YLAIRTAQVPDNPSQPMFMRIYCGLKTSCVVTAGQLANAHVDYTSRPAIVFRISAKNEKG
YGPATQVRWLQERKESSSK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccctccctcctgaactggaggcgggtttcctccttcacggggcaggttccc
cgcgcccggcacgggcaccgggccgtggccatccgggagctcatgatcatcttcggcgga
ggcaacgagggcatcgccgacgagctgcacgtctacaacacggtcacgaaccagtggttc
cttcctgcagttagaggtgatattcctccaggctgtgctgcccatgggtttgtctgtgat
ggcaccagaattctggtctttggaggaatggttgaatatggaagatacagcaatgagctc
tatgaattacaggcaagccgttggctttggaaaaaaataaaacctcgacctcctgctacc
ggtttacctccttgtcctcgactgggacatagcttttctttatatggtaataaatgttat
ttatttggtggcctggccaatgagagtgaagattcaaacagtaatgtccccaggtattta
aatgacttctatgaactggagctacagcatggctctggcgtcgtggggtggagcatccca
gtgaccaaaggcgtcgtgccttccccgcgagagtcccacacggccgttatatattgcagg
aaggattcgggcacccccaaaatgtacatttttggaggaatgtgtggttcccggcttgat
gacttatggcaactcgatctagaaaccatgtcatggtcacaaccagaaaccaaaggaact
gtgccactcccgcggagtcttcacacggccaatgttataggaaacaagatgtatgttttt
ggtggatgggttccccaaactacgaacaacgttgaagcttctcaggactctgaatggcgg
tgtaccagctcgttttcttacctaaatttggatacagcagaatggactagtctagtatcc
gattctcaagaggacaaaaagaactcgcggccgagaccaagagccgggcactgtgctgtt
gccattgggacacgcctgtatttttggagtggcagggatggctacaaaaagtccatgaac
aatcaagtttgctgcaaagacctttggtaccttgatactgagaaaccaccggcaccatca
caagtccaagtgatcaaagcgactactaactctttccaagttaaatgggatgaagttcct
actgtggaaggttatctgcttcagctgaacacagatctgccatatcaagcggcctcccca
gatgctcacgcaaacttgcaaggagtccaagcagatctttccagacaagccagtaataac
actctaccccacaatatgccagtttctcacttatctcaagaattgttaaagctagaagat
acgggaaatagcacagagtctgaccataaagtcagaaaaggaattgcgataaaaagtcaa
tcagatcataaggaatttgagcgccatgtcccttcgattccaccctttgcactggcaact
catgtggcagatggcagctgttcagtggatatgcgcaagaaaaatgaaggtgctcaaact
tcaaaaaatgtaagtgagtcatatggtctggatttaaggacagtacatcctgaagctgct
gtatccagtgccatttctggtacacataccatggtaccccagcggatcattaaaactgag
tcaaccaatacaaatggggcagttgttaaagatgagacatcactcacggcattcagcgga
aaatcagaagctgacgaagcatttgtgcagccagtaaccaaaggcagctctgccgaaacc
caggactctgctgctccgttatcaaaagatactacttcaaagccaatgaccctagaaaga
aaaggagaacgacagtggtgtgatgtggggatcttcaaaagtaacaccgctttggttaac
cagttctacttgctgccaaaaggaaagcaggatatttctaaggtaggaaatacagatgcc
ccagactacagtttacttaaacaacaagatcttgttccaggcacagtgtacagattcagg
attgctgccatcaatggctgtgggataggccctttcagcaaaataagtgaattcaaaaca
tgtattcctggttttcctggagctccttgtgctgtcagaatctcaaagaatgttgactgt
atccatctttcctgggaacctccagcttcaccttctggaaatattttggaatattcagcc
tacttggctattcgtacagcacaggtgccagataatccaagtcagcccatgttcatgagg
atttactgcggcctgaaaacttcttgtgtagtgactgcggggcagctcgccaatgcgcat
gtcgattacacctctaggcccgccattgtgttcagaatatcagccaagaatgaaaaggga
tatggaccagctacccaggttcggtggcttcaagaaaggaaggagtcaagttccaagtag
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