Sarcophilus harrisii (Tasmanian devil): 100920927
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Entry
100920927 CDS
T02286
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100920927 (BTAF1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100920927 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
Cnd1
UTP20_C
DGCR6
Motif
Other DBs
NCBI-GeneID:
100920927
NCBI-ProteinID:
XP_031811899
Ensembl:
ENSSHAG00000018664
LinkDB
All DBs
Position
2:585918352..586028272
Genome browser
AA seq
1864 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRLKQESTSESSMEDSSATDRLSFDRFDICRLLQHGASLLG
SAGAEFEVQDDKSGEVDPKERIARQRKLLQKKLGLDMGAAIGMNTEELFNDEDLDYTPAS
ASLVNKQPVGKTSGCLIARNITALQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSKD
AVESNEKSNDSADGEPEEKRRKIANVIINQPATESKVLIDNVPDNSSLFEETNEWPLESF
CEELCNDLFNPSWEVRHGAGTGLREILKAHGKSGGKIGDSTLEEMIQQHQDWLEDLAIRL
LCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNEIGVHKTVDVLLKLLTQEQWEVR
HGGLLGIKYVLAVRQDVIKTLLPKVLTKIIEGLQDLDDDVRAVAAASLVPVVDSLVHLQS
HKVPFILNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVQQCSIQQSLTVLVPRVWPFL
HHTISSVRRAALETLFTLLSTQDQSSSSWLTPILQDMLRHIFQFCILESSQEILDLIHKV
WMELLSKASVQYVVAAACPWMGAWLCLMMQPSHLPIDLNMLLEVKSRSKEKTGGKMRQGQ
NQSKEVLQEYIAGADSIMEDPAMRDFVVMRARVMAAKLLGALCCNICDPSVNVASQDIKP
AESLGHLLLFHLNSKSALQRISVSLVICEWAALQKECKAVALAVQPRLLGILSEHLYYDE
IAVPFTRMQNECKQLITSLADAHIEVNSRINYSVFTIDQANELVTTVFNEVTASFNLNPK
VLQHLESKRQQVQMTVAETNQEWQVLQLRVHTFAACAVVNLQQLPEKLNPVIKPLMETIK
KEENTLVQNYAAVCIAKLLQQCTSRTPCPNSKIIKNLCSSLCVDPHLTPCVACPAPPQTS
HENSKGQNTDKDGMHHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAAKAQLAEFPPGSS
GNIPAELDEAQKPYLVQRRGAEFALSTIVKHFGHEMAVRLPHLWDAMVGPLRNTINIKGF
DGKSLLEKGDGPAQELVNSLQVFETAAAAMDTELHPLLVQHLPHLYMCLQYPNTAVRHMA
ARCVGVMSKIATMETMNIFLEKVLPWIGAIDDSTKQEGAIEALASVMEQLDVGIVPYIVL
LVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQ
LLDGKKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILA
GDHCFRAQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTER
VRLQHQVKKHNLIVASYDVVRNDIDFFKNIKFNYCILDEGHVIKNGKTKLSKAVKQLTAN
YRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDE
TVSSAALAEETEKPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEFKNTTEQLAAQNSS
LRDIQHAPKLSALKQLLLDCGLGNASTSESGTEAVVAQHRILIFCQLKSMLDIVEHDLLK
PHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEH
DWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASL
QSMGTDQLLDLFTLDKDGKVEKANTSTPSGKASMKSILENLSDLWDQDQYDTEYSLENFM
HSLK
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccaggcttgatcgtctttttatcttactggatactggcactaccccagta
acaagaaaagcagctgctcagcaacttggagaagtggtgaaactccatccacatgaacta
aataatcttttatctaaagtactgatatatttaaggagtacaaattgggatacccgaatt
gcagctggacaagctgttgaagccatagtgaaaaatgtacctgaatggaatccagtgccg
agattgaagcaagaatctacttcagaaagttctatggaagattcgtctgccacagatcga
ttgagttttgacagatttgacatctgtagattgctgcaacatggagcgtcacttcttggg
tctgctggtgcagaatttgaagtccaggatgacaaatcaggggaagtggaccctaaagag
agaatagctcgtcagcgcaaactgttacagaagaaacttggccttgatatgggagcagca
attggaatgaataccgaagagctctttaatgatgaagatctggactacactccggcttca
gcttcccttgtaaacaaacaacctgtaggtaaaacctcgggctgtttgattgcaaggaat
attacagctcttcaagctgctgagttgattgactcagaatttcgagcagggatgagcaac
aggcaaaagaataaagctaaaagaatggcaaaattatttgcaaagcagagatccaaggat
gcagtggaaagcaatgaaaagagcaatgatagtgcggatggggaaccagaagaaaagaga
cggaagatagccaatgttattattaatcagcctgcaactgagtccaaggtcttgattgat
aatgtgccagacaattcttccttatttgaagagacaaatgaatggcctttggaaagcttc
tgtgaagagctgtgtaatgatctttttaatccatcctgggaggttcgacatggtgctggt
actggactgagggaaattctcaaagctcatggaaaaagtggtggtaaaataggagatagc
actttggaggagatgattcaacagcatcaggattggctagaagacttggccattagactt
ctttgtgttttcgcattagacagatttggtgactttgtttcagatgaagttgtagcacca
gttcgtgaaacttgtgctcaaactttaggtgtggtgttaaaacacatgaatgaaatagga
gttcataaaaccgtggatgtactccttaaattgctcacacaagaacagtgggaagtgaga
catggtggcctgttaggaataaaatatgttttagcagttcgtcaggatgtaattaaaact
ttattgcctaaagttttgactaaaataattgaaggactccaggaccttgatgatgatgtc
agggctgttgccgcagcatcattagtaccagtggtggatagtcttgttcatcttcaatca
cataaggtaccttttattttaaatacattatgggatgctcttctggaactagatgatctc
actgcttcaacaaacagtatcatgacccttctttcatcccttctaacttatcctcaagtt
caacaatgcagtatccaacagtcacttacagttttagtaccacgtgtttggccatttttg
catcacactatatcatcagttcgaagagcagcattggaaacgctatttacattattgtca
acacaggaccagagttcttcatcgtggttaacacctatcctacaggatatgctgcggcat
atttttcagttttgtattttggaaagcagccaagaaattctggaccttatccacaaggtg
tggatggaactgttgagcaaggcttcagtacaatatgtagtggcagcagcttgtccctgg
atgggtgcctggctttgcttaatgatgcagccttcccatttacctattgatttaaatatg
ttgctggaggtaaaatccagatctaaggaaaaaacaggtggtaaaatgcgccagggtcaa
aaccaaagcaaagaagtactgcaagaatatattgcaggtgcagatagcatcatggaagac
cctgcaatgagagattttgttgttatgcgggccagagtgatggcagccaagttgttagga
gcactttgttgcaatatttgtgatccaagtgtaaatgtagcttctcaagacattaaacca
gctgagtctcttggccatttgctactttttcacctgaactcaaaatctgctttgcaaagg
attagtgtttctttagtaatctgtgaatgggctgctttacaaaaggaatgtaaagctgtt
gctttagctgtgcagccacgtttacttggtatcctttcagaacatctgtattatgatgag
attgccgttccatttacacgaatgcagaatgaatgtaaacagcttattacatcattagct
gatgcacatattgaagttaatagcagaataaattacagtgtgtttaccatagatcaagct
aatgagctggtcacaactgtttttaatgaagtcacagcgtctttcaatttaaatccaaaa
gtgttacagcatttagaaagtaaaaggcaacaagttcaaatgactgttgcagaaacaaat
caagaatggcaagtgctgcaactgagagtgcatacatttgctgcatgtgcagtggtgaat
ttacagcagcttccagaaaaattaaaccctgtcataaaaccattaatggagactattaag
aaagaagaaaacacactagtacagaattatgcagctgtgtgcatagcaaaattgcttcag
cagtgtacatcaagaactccttgtcctaattcaaagattattaaaaatctctgtagttca
ctatgtgtggacccacatcttactccttgtgttgcatgtccagcaccacctcaaaccagc
catgaaaattctaaaggacaaaacacagataaagatggaatgcatcacactgttactaag
cacagaggtataatcacactctataggcatcagaaagctgcttttgccatcacaagcaga
cgaggccctactcctaaagcagcaaaagctcaacttgcagagtttcctccaggaagcagt
ggaaatatccctgctgaattggatgaggcacagaaaccatatttagtgcaacggagagga
gctgaatttgccttgtcaactattgtgaaacattttggtcatgaaatggctgtaaggtta
ccacatctctgggatgctatggttggtcccctaaggaatacaattaacataaaaggtttt
gatggaaaatccctactggaaaagggagatggccctgctcaagaattggtgaattctctg
caagtttttgaaacagcagcagctgcaatggatactgagcttcatcctttgttggtacag
catttgccccatctgtacatgtgtcttcagtatcccaacactgcagtgagacacatggct
gctcgttgtgttggagtcatgagcaaaatagctaccatggaaacaatgaatattttttta
gagaaagttcttccatggataggagcaattgatgatagtaccaaacaagaaggtgcaatt
gaagctcttgcctctgtaatggaacaactagatgttggcattgttccatatattgttctt
ttagttgtacctgtattgggaagaatgagcgatcagacagacagtgtacggttcatggct
acacaatgctttgcaacattaattaggctaatgccacttgaggctggcattcctgaccca
ccaaatatgtcagaagaattaattcaattgaaggccaaagaacgacactttttggagcag
ttattggatgggaaaaaattagaaaattataaaattcctgttccaatcaaagctgaactc
agaaaatatcagcaggatggtgtgaattggttggcatttcttaacaagtacaagcttcat
ggaattctttgtgatgacatgggtttaggaaaaacattacagtctatttgcattctagca
ggagaccactgtttcagagcccaggaatacgcaagatctaaattagcagaatgcatgcca
cttccatcgttggtggtttgtcctcccactctaacaggtcactgggttgatgaagtaggt
aaattttgttccaaagaatatctcaatcctttgcactacactggacctccaactgaaaga
gtaaggttacagcaccaagtcaaaaaacataatctgatagtggcttcttatgatgttgta
cggaatgacatagacttttttaaaaatattaaattcaactactgtattcttgatgaaggc
catgtcatcaaaaatggaaaaacgaaattatcaaaagccgtaaaacagttgactgccaac
tataggatcattctttctggaacacctatacagaacaacgttttggagctctggtcactc
tttgatttccttatgccaggatttttgggtactgaacgtcagtttgcagctcgttatggt
aaacctatattagcaagtagggatgctcggagttccagtcgagaacaagaagcaggagtc
cttgcaatggaagcactacatcgccaggtcctcccatttctcttgaggagaatgaaagag
gatgttttgcaggatcttccacccaaaattattcaagattattactgtactcttagtcct
ctacaggttcagctgtatgaagattttgccaagtctcgtgccaaatgtgatgtcgacgaa
accgtttcctcagctgcacttgccgaagaaactgaaaagccaaagctaaaagctacaggg
catgtgttccaggcattacaatatttacgtaaactgtgcaaccatccagcattagtctta
acaacccaacaccccgaatttaagaatactactgaacaactggcagctcagaactcttct
cttcgggatattcagcatgctcctaaactctctgctttgaaacaattgctgctggactgc
ggtttgggaaatgccagtacttcggagagtggcacagaagctgttgtggctcagcacagg
atactgatcttctgccaactcaagagcatgctggacatagtagaacatgatcttctcaaa
cctcacctgccctctgtcacatatctacggctagatggaagcatacctgccgggcaaagg
cattccattgtctcacggttcaacaatgatccatccatagatgttcttttactgactaca
catgttggtggactgggtcttaacttaacaggagctgatacagttgtatttgttgagcat
gactggaatcctatgagagatttacaagcaatggatagagcacatcgtattggccagaaa
cgggttgtaaatgtatatcgattaataacaagaggaacgttggaagagaaaataatgggt
ttgcagaaattcaaaatgaatattgcaaatacagttattagccaagagaatgctagtctg
cagagcatggggactgatcagcttctggacctgtttactcttgataaggatggaaaagtg
gaaaaagcaaatacctcgacaccttctggaaaagcaagtatgaaatcaatcctggagaac
ctcagtgatctttgggatcaagatcaatatgacactgagtacagtcttgaaaattttatg
cattctctcaaataa
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integrated database retrieval system
