Sarcophilus harrisii (Tasmanian devil): 100928778
Help
Entry
100928778 CDS
T02286
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100928778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100928778
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100928778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100928778
NCBI-ProteinID:
XP_031803677
Ensembl:
ENSSHAG00000010846
LinkDB
All DBs
Position
1:651635296..651642874
Genome browser
AA seq
496 aa
AA seq
DB search
MTSLGTSSQTVTEYVVRVPRNNLKRYNIMAFNAADKVNFSTWHQAKMERDLSNKKIYQEE
EMPESGAGSEFNRKLRDEARRKKWHPSDRDKASPGPQSQWKTGGGSGLFRLPPALGDEGP
GSPWDCPSWRPCMMHSLVCRRNKVLNHFSIMQQRRLKDQDHNEDEDEHKEKKNRKKPSEL
RIHDLEDDLEMSSDDSNSSGEEGEKVPKSKKKAAPSRGGKKKKKKGSDDEAFEDSDDGDF
EGQEVDYMSDGSSSSEEEAVGKAKVVQQEEDGPKGIDEESESSEESEEEKPPEEEEKEEE
DKKAPNPQEKKKRKGDSSEESDTSEESDIDNEASSALFMTKKKTPPKREQKASGNSSRGN
SRPSTPSVDSGSTSSTLRAAASKLEQGKRQTGPSDTPAAKRLRLDAGPQSISGKSTPQPQ
SGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKTGLSSDQTVNVLAQILKRLN
PERKMINDKMHFSLKE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttgggcaccagcagccagactgtgaccgagtatgtggtccgcgttcccagg
aacaacctcaagaggtacaacatcatggcgttcaacgcggccgacaaagtcaacttctcc
acctggcaccaggccaagatggaacgggatctgagcaacaagaagatctaccaggaggaa
gagatgccagaatctggggctggcagtgagtttaaccggaagctccgggacgaggccagg
aggaagaagtggcatccctcagaccgggacaaggccagccctggccctcaaagtcaatgg
aaaacaggaggaggctctggcctcttccggcttcctccagccttaggggatgagggcccc
gggagcccctgggactgcccctcctggagaccctgcatgatgcacagccttgtttgcagg
aggaacaaagtcctgaaccacttcagcatcatgcagcagcggcggctgaaggaccaggac
cacaacgaggatgaagatgagcataaagagaagaagaaccggaagaagcccagtgagctc
cgcatccacgacctggaggatgacctggagatgagctctgatgacagcaacagcagtggg
gaggagggagagaaggtccccaagagcaagaagaaggcagctccctccagagggggcaag
aagaagaagaagaagggctctgatgatgaggcctttgaggacagcgatgatggggacttt
gagggccaggaggtggactacatgtcagatggctccagcagctctgaggaggaggcagta
gggaaagcgaaggtggtccagcaggaggaggatggccctaaaggtattgatgaggaaagt
gaaagcagtgaggagagtgaggaagagaagccccctgaggaggaggagaaggaggaagaa
gataagaaggcccccaacccgcaggagaagaagaagaggaaaggagacagcagcgaggag
tcagacacctccgaggagagcgacatcgacaacgaggcgtcctcggccctcttcatgact
aagaagaagaccccccccaagagggagcagaaggcctcgggcaacagctccaggggcaac
agccgcccaagcactcccagcgtggacagcggcagtacgtcctccaccctgcgggcagct
gccagcaagctggagcaagggaagcggcagacgggacccagtgatacgcctgctgccaag
cgcctgaggctggatgccgggcctcagagcatctcagggaaatccacccctcagcctcag
tccggcaagtccacgcccagcagcggtgatgtgcaggtgacagaggacgcggtcaggcgc
tacctgacccgaaagcccatgaccaccaaggacctgctgaagaagttccagaccaagaag
acggggctcagcagcgaccagacagtcaacgtgctggcccagatcttgaagcgcctcaac
ccggagcgcaagatgatcaatgacaagatgcacttctctctcaaggagtga
DBGET
integrated database retrieval system
