Sarcophilus harrisii (Tasmanian devil): 100931657
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Entry
100931657 CDS
T02286
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr05014
Amyotrophic lateral sclerosis
shr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100931657 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100931657 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100931657 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100931657 (NUP98)
03036 Chromosome and associated proteins [BR:
shr03036
]
100931657 (NUP98)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100931657 (NUP98)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100931657 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100931657
NCBI-ProteinID:
XP_012400827
Ensembl:
ENSSHAG00000008956
LinkDB
All DBs
Position
3:complement(531237452..531341984)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGNTQTKPG
GLFGSNSFSQPATSSTSTGFGFGTSTGTSNSLFGAASTGASLFSSQNNAFAQNKPTGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSTSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGATTGLFGSSTATSSTTG
LFGNSTTNAGFAYGPNKTGFGTSTTGFGTNTGSLFGQPTQPTTSLFSKPFGPAATTQNAG
FSFGNTNTLGQPNTNTMGLFGGTQASSGSLFGTATNTSAATGFGTGTGLFGPTNTGFGAV
GSTLFGSNKPAAFGTTTTSAPSFGTTSSGLFGNKPTLTLGTNTNTSNFGFGGSNSGSSIF
GSKPAPGTLGTGLGTGFGTALGAGQASLFGTNQPKIGAGTLGTGAFGTPGFSASTATLGF
GAPQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSNLFSPVSREAEDLASPSDYPENGERFSFLSKAVDENHQQDGDDDSLVSRFY
TNPIAKPIPQTPENAVNKHHSSVDDSIVVLNMRGALRNGLEGSSEEASFHDESLQDDREE
EEESAYQIHPAGIILTRVGYYTIPSMDDLAKITNEKGECIVTDFTIGRKGYGSIYFEGVV
NLTNLNLDEIVHIRRKEVIVYLDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPE
RLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEDEEEHQCKAEA
KKLKTAPMPPVGQPVPVQMALSGKPSLPSQSQSPEVEQLGRVVELDSDMIDITQEPVLDS
IVEEIIPEEQEPVSASTHIASSLGINPHVLQIMKASLLAEEEDSDWVLDQRFGKLPSKVD
SSQEICSPRLPISSAHPTKSRTLVGGLLQSKFTSGAFLSPTASVPECRNLRASALTSAPS
TSPWSVPPPLAPVFAVPTPAPEVQLKTVGVRRQPGLVPLEKSVTCGKGKLLMDMALFMGR
SFRVGWGPNWTFVNSGDQLSGCQEAGDHHNTESMEYGFLPNPITVKSLTESPFKVHVEKL
SLRQRRMDRDLQLYQTPLEIKLKHSTVHVDELCPLVVPNPGVSVIHDYADWVKEISGDLA
ESETVVKHWSLAWTLCEAIWGHLKELEDQLDEPSEYVQSLERRRAFSRWLSQTAADRIEE
EVALSRQDSPIEAVFSYLTGRRISEACRLAQQTGDHRLALLLSQLGGSQPVRELLTMQLV
DWHRLQADCFIQEDRLRIFTLLAGKPVWRLSEQKSINVCSQLDWKRSIAIHFWYLLPPTA
SISQALSMYEEAFQNTSESEKYACSPLPSYLEDSGSVLEDDDTRRPLRDVCFHLLKLYSD
RHYDLNQLLDPRSITSDPLDYRLSWHLWEVLQSLNYTHLSEQCEGVLHASYAAQLESEGL
WEWAIFVLLHITNTSMREKAIRELLTRHCRLSETPESWAKESFLTQKLCVPAEWIHEAKA
VRAHMECDQHLEALYLFKAGHWNHCHKLVIRHLASDAIINENYSYLKGFLEDLSPPERSS
LIQDWETAGLVYLDYIRVIEMLGQIQQLDCPGYELEKLHTKVTSLCNRIEQIHCSNAKDR
LAQSDMAKRVANILRVVLSLQQAPEGALDSPADLQRVPLRLLAPHIGRLPMPEDYALEEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaactccctttgggggtggcactggtggctttggcacaact
tcaacatttggacagaacactggttttggtaccacaagtggaggggcatttggaacatct
gcatttggttccaacaacaatactggaggcctctttggaaacacacagactaaaccaggt
ggcttgtttggatcaaattcatttagccaaccagccacctcctccacaagcactggcttt
ggatttggaacatcaacagggacgtcaaatagcttgtttggagctgctagcaccggagca
agtctcttctcatcccagaacaatgccttcgcacaaaataaacctactggatttggaaat
tttggaacaagcactagcagtggaggtctatttggaaccacaaatacaacttccaaccct
tttggtggcacatctacttccctttttggaccgagtagttttacagcagctcctactgga
accaccataaagtttaatcctccaactggcacagatactatggtcaaagctggagttagc
accaacattagtaccaaacatcaatgtattactgctatgaaagaatatgaaagcaaatca
ctggaggaacttcgtttggaagattatcaagctaacaggaaaggtcctcagaaccaggtg
ggagcaggtgccaccacagggctgtttggctcttctacagccacctccagcaccacgggc
ctctttggaaactccactactaatgcaggttttgcatatggcccgaataaaactggcttt
gggacaagtactactggattcgggacaaatacaggtagtctctttggtcagccaactcag
ccaaccaccagcctcttcagtaagccatttggtccagctgcaaccacccagaatgctggc
ttttcatttgggaataccaacactcttggacagccaaataccaacacgatgggtttattt
gggggaacccaagcctcatctggaagtctttttgggacagctacaaatacgagtgctgct
accggatttggaacaggaacaggcctctttgggccaaccaacacaggatttggtgctgtt
ggttcgaccctgtttggcagtaacaagcctgctgcatttggaactactacaaccagtgct
ccttcgtttggtacaaccagtagcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggtggaagcaatagtgggagtagtattttt
ggaagtaaacctgcacctggtactcttggaacaggacttggaacaggctttgggacagct
cttggggctgggcaggcatctttatttggaaccaaccagcccaagataggagcagggacc
ttgggcacaggagcttttggaacccctggatttagtgcttccacagccacgttgggtttt
ggtgctcctcaggctcctgtagctttgacagatccaaatgcttctgctgcccagcaagct
gttctccaacagcatatcaatagtctgacatactcaccatttggagactctcctctcttc
cggaatcccatgtcagaccccaagaagaaagaagaacgcttgaaacccacaaacccagct
gcacagaaggctctgaccacccctactcactataaactgactcctcgccctgccacaaga
gtccgacccaaagctcttcagacaacagggacggccaaatcccatctctttgatggacta
gatgatgatgagccatctctagccaatggagctttcatgcccaagaagagtatcaagaag
ttggttttaaagaatctcaacaatagcaacctcttttctcctgttagtcgggaagctgaa
gatctggcctcaccatcagattatccagagaatggggagagatttagttttctcagcaaa
gctgttgatgagaaccatcagcaggatggggatgatgattctcttgtgtcacgtttctac
actaaccccattgccaaacccatcccacaaacccctgagaatgcagtaaataaacaccat
agcagtgtggatgactccattgtcgtgttaaacatgcgtggtgccttacgaaatggccta
gaaggaagcagtgaagaggcctctttccatgatgagtctttgcaggatgatcgggaagaa
gaagaggaaagtgcttatcaaatccatccagcaggcattattctcaccagagttggctat
tatacaataccttctatggatgacctagccaaaattaccaatgaaaagggagagtgtatt
gtaacagatttcaccataggtcgaaaaggttatggctcgatatattttgaaggagtggtg
aatttaactaacctcaacttggatgaaattgtacatattcgtagaaaagaagtcattgtc
tatctggatgatgagctgaaacctcctgtgggagaaggcctaaataggcgggcagaagtt
actttggatggagtttggccaactgacaaaacttctcgttgcttaataaagagtcctgaa
cgattagctgatatcaactatgagggcaggttagaagctgtttcacgaaaacaaggtgcc
cagttcaaggaatatcgaccagagactggttcttgggtgtttaaggtttctcacttttca
aagtatggcctacaggattctgatgaggatgaggaggagcatcaatgtaaagcagaagcc
aagaagttgaaaacggctcccatgcctcctgtaggccaaccagtaccagtacaaatggct
ctcagtggcaaaccttctcttccatcccagagccaaagcccagaggtggaacagctaggg
agggttgtggagctggacagcgatatgatagatatcacccaggagccagttttggattcc
atagtagaagaaatcatccctgaagaacaagagcctgtatctgcttcaacacacattgca
tcttcactgggcattaatccacatgtcttacagatcatgaaagcatctttgcttgctgag
gaagaagattcagattgggtccttgatcagcgctttggcaagcttccttccaaagttgac
tcttctcaagaaatctgttctcctagacttcccatttcatcagcacacccaacaaaatcc
cgaacattagttggtggtttactacagtctaagtttacaagtggagcttttctgtctcca
actgcctctgtgccagaatgtcgaaatctcagagcttcagctttaacaagtgctccttct
acatctccttggtcagtccctccaccactggctcctgtgtttgcagtgccaaccccagcg
cctgaggttcagttaaaaactgtgggtgttcgaagacagcctggtcttgttcccctggaa
aaatctgtcacctgtggcaaaggaaaactcttgatggatatggcactcttcatgggacgt
tcattcagagttggctggggccccaactggacctttgtgaatagcggtgatcaactgagt
ggatgtcaggaagctggagatcatcacaacactgaatctatggaatatggattcctgcct
aatccaataactgtcaaatccttaacagagtccccattcaaagtccacgtggaaaaactg
agcttgaggcaaaggaggatggatagagatttacagttataccagactcccttggagatc
aagcttaagcatagcactgttcatgtagatgagctgtgtcctcttgtggtccccaatcct
ggagtatccgtcattcatgactatgcagactgggtgaaagagatatcaggagacttagca
gaatcagaaactgtagtaaagcactggagcctggcatggacactgtgtgaagccatctgg
ggtcacctgaaagaactagaggatcagctggatgaaccaagcgagtatgtgcagagcctg
gagcgccgaagggctttctcccgctggctgtcacagacggcggctgatcgcattgaagag
gaagtggccctgtcccgacaagacagtcccatcgaggcagtcttcagctacctcaccggc
aggagaatcagtgaggcctgtcgcttggcccagcagacaggtgatcaccgacttgccctt
cttctgtcccagcttgggggcagccagccagtgcgggagctgctcaccatgcaacttgta
gattggcacaggctccaggcagattgcttcatccaagaggatcgactacgcatttttact
cttttagctggaaaaccagtgtggcgactctcagaacagaagagtatcaacgtatgttcc
cagctggattggaagcgctcaattgcaatccatttttggtatctccttcctcctactgct
tccatttcccaggctcttagcatgtatgaggaagcattccagaacacctctgaaagtgaa
aaatatgcttgtagtcccctgccttcataccttgaagactctggcagtgtcttggaagat
gatgatactaggagacctctcagagatgtgtgctttcacctgctcaagctctatagtgat
agacattatgatctgaatcaactgttggatccccggagtataacctctgatcctttggac
tatcgcttgagctggcacctctgggaagtcctgcagtccctgaattatacccacctgtca
gagcagtgtgaaggtgtgctgcatgccagctatgctgctcagcttgagagtgaaggactg
tgggaatgggctatctttgtcctactgcatatcaccaacacaagtatgcgtgagaaggca
ataagggagttgctcactcggcactgcaggctgtcagaaacccctgaatcctgggccaaa
gagtccttcttgacccaaaagctgtgtgtgcctgctgagtggatccatgaggccaaggct
gtgcgtgcgcacatggaatgtgaccagcacctggaggccctctacctatttaaggctgga
cactggaaccactgccacaaacttgtgatcaggcatttggcctctgatgccattattaat
gaaaactacagctacctaaaaggattcctggaagatttatcccccccagaacgcagcagc
cttattcaggactgggaaacagctggactagtttatctggattatatccgggtcattgaa
atgctcggccaaattcagcaactcgattgtccaggctatgaattagagaaattgcatacc
aaagtgacctcactttgtaaccggatagaacagattcattgctccaacgccaaggaccga
ctggcccagtcagatatggccaagcgtgtggccaatatccttcgggttgttttgagcctt
cagcaggccccagaaggagccctggattcacctgcagacctgcagcgtgtcccactgcgt
ttgctggctccccatattggccggctccccatgcctgaggactatgccttagaggagctg
cgtagcctcacacagtcctacctccgagaactgactgtggggagccagtga
DBGET
integrated database retrieval system
