Sarcophilus harrisii (Tasmanian devil): 100933439
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Entry
100933439 CDS
T02286
Symbol
ACIN1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100933439 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100933439 (ACIN1)
03015 mRNA surveillance pathway
100933439 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100933439 (ACIN1)
03041 Spliceosome [BR:
shr03041
]
100933439 (ACIN1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100933439 (ACIN1)
Spliceosome [BR:
shr03041
]
Complex C
Other components
EJC/TREX
100933439 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
100933439
NCBI-ProteinID:
XP_031810894
Ensembl:
ENSSHAG00000013673
LinkDB
All DBs
Position
2:complement(494070663..494108166)
Genome browser
AA seq
1261 aa
AA seq
DB search
MPEAVETEPSTSHKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHTAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEG
KSCSISEEKGESDDERPRKGERRSSRVRQARAAKLSESSQAPEEEEERETPSRNLRARAD
RNVKTEEDEEEEEEEEEEEEEEEEEEEEEMQKVVELPVLKQFQGEKEETRAAFQEVIEGV
TKSTEIQEQEEVEGGGRTTRAQQEVETCQLAKLQQEKGVKAPEVEVEEEEEDEGEREVKT
TKPPEEKQKSPSPPRLTEDLLKVSLRSQPEQVANEEETPPPLLTKEASTPPAPSEPPTGE
ETEPLEGPAPPDLTQRSPPCEEAEAKELLLPPHTVQVGGRLPSLPSPAGTKAKSPAEIAQ
EGNSLLPIEISTVIAPPGEEAFQSEPERSAPLIALKAEESNLGKVNTEVPSEQPPSLVQK
ESKGDSPTPLSSHRTKRSADSSPSSQSSSSSSTSRSRSRSPDSSGSRSRSPPRSKQRDSS
WSRSCSNPRSGTQVGSRSTSESRSRSRSRSRSASSNSRKSRSPGVSRDSSTSYSHTKDPS
PGQEIAPLSSPSVQQQQVLEPKERTTVSPAFAPVRGVSQAEPVEKHKTQRLKPERGSPKK
SEVEEAETPAIIETQAPEVQTLQQPAPGSSQHTVEEKEEVTMETAENRPENEVPEPPMPI
ADAASNEERPEGNAEDEEKKESSMPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWG
ASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDETERNGEDGTHD
KGLKICRTVTQVVPAEGQENGQREEEEEEKEPEVEPPEAPQVSVEVALPPPVEHEVKKVT
LGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKINNIVHISNLVRPFTLGQLKELL
GRTGTLVEEAFWIDKIKSHCYVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDEL
DFHRGLLPDRPSEPKTEEQGGPRPLHPPPPPPAQPPHHPRAEQREQERAVREQWAERERE
MERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLD
DLFRKTKAAPCIYWLPLTDCQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERS
RQLEREKRREHSRERERERERERDRGDRDRERGRERDRRDTKRHSRSRSRSTPVRDRGGR
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgagacggagccgagtacctcacacaagatggcggagctggaggag
gtgactctggacgggaagccgcttcaggcgctgcgggtgaccgacctgaaggccgcacta
gaacagcgaggcctggccaagagtggacagaagagtgctctggtcaagcggctcaaaggg
gctctaatgctggagaatttacagaaacactcgacacctcacactgcattccagccaaat
tcccagattggtgaggagatgagccagaatagctttataaagcaatatctggaaaagcag
caggaacttctcaggcagcgactggaacgagaagctcgagaagctgcagaacttgaagga
aaaagctgttccatctctgaagagaaaggtgaatctgatgatgaaagaccaagaaaagga
gaaagacggtcatccagggtgagacaggcaagagcagccaagctttctgaaagtagccag
gctcctgaggaagaagaggaacgggagacaccttccagaaatctgagagccagagcagat
cgaaatgtgaaaacagaggaagacgaagaggaagaggaggaagaagaggaagaagaggaa
gaggaggaggaggaggaagaagaagaaatgcaaaaagttgttgagctgccagttttgaaa
cagtttcaaggggaaaaggaggaaaccagagcagcatttcaggaggtaattgagggagta
accaaaagcacagaaatccaggagcaggaagaggtggaggggggaggaagaacgacaagg
gcccagcaggaagtggaaacttgtcagctagccaaactgcagcaagagaaaggtgtaaaa
gcaccagaagttgaagtggaagaagaggaagaggatgaaggagaaagagaagtaaaaact
acaaaacccccagaagaaaaacaaaaatctccttccccacctcgactgactgaagatcta
ctgaaggtttcccttaggtcacaaccagaacaagttgccaatgaggaagagactccccca
cccctgctgaccaaggaagcatccactccaccagctccaagtgagccccccactggggaa
gagacagagcccttggaaggcccagcccctcctgaccttacccagaggtctcctccctgt
gaagaggctgaggccaaagaattacttttacccccacacactgtccaggtggggggaagg
ctgccttccttgccaagccctgcaggcaccaaagcaaagtctccagcagagatagcacaa
gagggaaattcccttcttccaattgaaataagcacagtgattgcacccccgggtgaggag
gcttttcaaagtgagccagaacgttctgctccactgattgctctaaaagctgaggaatca
aacctaggcaaggtaaacactgaggttccctctgaacagcccccgtctttggttcagaag
gaaagcaaaggagactctcctacccctctatcaagccacaggacgaaacgttcagctgac
tcatccccctccagccagtcttcatcatcttcctccacctcccgatcaagatcccgctct
ccagacagctcaggctctagatcccgctcacctcccagatccaagcagagggattcatct
tggtcacgctcttgttccaacccccgttcaggaacccaagtaggctccagatcaacatca
gagtctaggtcccgttctcgttctcgatctcgttcagcatctagcaatagtaggaaatct
cggagccctggagtttccagggatagcagcaccagctactctcacaccaaagatccctct
cctgggcaggagattgcacctctcagcagtccgtcagtgcaacagcagcaggtccttgaa
ccaaaagagaggactaccgtctctccagcctttgccccagtgaggggtgtgagccaggct
gaaccagttgagaagcataagacccagaggttgaaaccagagcggggaagtcccaaaaag
tctgaagttgaagaggcagaaacacctgccatcatagagacccaagccccggaggtgcag
acccttcagcagccagctccaggaagcagccagcacactgtcgaggagaaggaggaagtg
accatggagacagctgaaaacaggcctgagaatgaggtgcctgaaccccccatgcccatt
gctgatgctgcaagcaatgaagagcgccctgagggcaatgcagaggatgaggagaagaaa
gagagctcgatgcccaaatccttcaagaggaagatctccgttgtctcggctaccaaaggg
gtaccagctggaaacagtgacacagaaggaggacaaccaggacggaagcggcgttggggg
gctagcacagccaccacgcagaagaagccttccatcagtatcaccactgagtctctcaag
agccttatccccgacatcaaacccctggcggggcaggaggccattgtggatctacatgct
gatgactcaaggatttctgaagatgagacagaacgtaatggtgaggatggaacccacgac
aaggggctgaagatatgccggaccgttactcaggtggtgccagcggagggccaggaaaat
ggacaacgtgaagaagaagaggaagaaaaagagcctgaagttgaaccccctgaagcaccc
caggtttctgtagaagttgccttgcctccacctgtggagcatgaagtaaaaaaagtgacc
ctgggagacactctgacccgacgttcaatcagccagcagaagtctggtgtgtctattaca
attgatgatcctgtccgtacagcccaggtgccctcaccacctcggggcaagatcaataac
attgtccatatctccaatttggttcgtccttttacattaggccaattgaaggagttgctg
ggtcgtacaggaacccttgtggaagaagccttttggatagataaaatcaaatctcattgc
tatgtcacgtattcaacagtagaggaagctgttgccactcgaacagctctgcatggagtt
aaatggccccagagcaatcccaaattcctctgtgctgattatgcagagcaggatgagctg
gattttcacagaggcctcttgccagatcgaccctctgagcctaaaactgaagagcaggga
ggcccacggcccctgcaccctccgcccccgcccccagcccagccacctcatcatccaagg
gcagagcagagggagcaggagcgggcagtgcgggagcagtgggcagagcgggagcgagag
atggagcgacgggaacgtactcgctcagaacgggagtgggaccgggacaaggttcgtgaa
gggccccgttcccgatctcgctcccgtgaccgccggcgcaaggaacgagccaagtccaaa
gagaagaagagcgaaaagaaagaaaaagcccaggaggaaccacctgccaagctgctggat
gacttgttccgtaagaccaaggcagcaccctgcatctactggcttcctctgactgactgc
cagattgttcagaaggaggccgaacgggctgagcgggccaaagagcgtgagaaacggcga
aaagagcaggaagaagaagaacagaaagaacgggagaaggaggctgagcgagagcggagc
aggcagctagagagagagaaacgtcgcgagcacagccgagagagggagagagagcgggaa
cgggagagggaccggggggatcgggatcgggaaaggggccgtgagagggatcgtcgggac
accaaaaggcacagtcgaagtcgcagccgcagcaccccagtgcgtgacaggggtgggcgc
cgctag
DBGET
integrated database retrieval system
