Stereum hirsutum: STEHIDRAFT_118506
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Entry
STEHIDRAFT_118506 CDS
T03127
Name
(RefSeq) NTF2-like protein
KO
K14284
nuclear RNA export factor
Organism
shs
Stereum hirsutum
Pathway
shs03008
Ribosome biogenesis in eukaryotes
shs03013
Nucleocytoplasmic transport
shs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_118506
03015 mRNA surveillance pathway
STEHIDRAFT_118506
03008 Ribosome biogenesis in eukaryotes
STEHIDRAFT_118506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_118506
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_118506
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
STEHIDRAFT_118506
mRNA cycle factors
Stress granule specific factors
STEHIDRAFT_118506
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
STEHIDRAFT_118506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAP_C
LRR_9
UBA_4
LRR_4
Motif
Other DBs
NCBI-GeneID:
18796306
NCBI-ProteinID:
XP_007300168
JGI:
Stehi1_118506
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MYSDAIAAPSGSRVVASNALRSAGLIDRDERMRDATDKHHAARKTTSKIRSHKPRLIDSI
KGDSHGPGPGPSRSSTLAQRLGSSADPLSIRGAARPTPAGRVRRNAISLNGTRVEPKGRP
MTAVRPLEVWREFVNRRYNPESRFLNLERMSEDEELGKARVLPPGVPGANGREAAVIFKL
AASLKPPVKTVSLANNNLHTCHALSTLPHYLPDLANLSLENNNIKRFTDLDHINMNTDKT
DKFKCLREFILLGNPLRTNDESHGRMDTYKNNMLRRFPTLEMLDKEPVTKIAFDGPSTSK
APHTGPRPIATTFPSQMMPAFVVGVDGALVSSFFSRFFPLFDTQRSALLDAYSDSATFSF
QANTSIPARARIQGFQYSKEMPHQRNLEWSTWLGAGHGGSRNLSRIANAVEKMVKSMHVG
REAVIGALEALPRTRHEMEGEGAGERFCVDGWPVQQGEMACLFLSIHGQFVELPTEGVRS
FDRSFILALAPAGSRAKLAGWDVEILSDQLVVRNYSSHEAWKPGPLLVQAPDPSSSSTSS
SSVPTTSAAGTAAPLSVLQIPPVVQEALNPIPEPQRSLVLQVCQRTGLTVQFAVECLAGN
GWELDKALANFEQVKSTLGREAFLTL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacgccatcgcggcgccctcaggcagccgcgtcgtcgcctccaacgccctc
cgcagcgcaggcctcatcgacagagacgagcgcatgcgcgacgccaccgacaagcatcat
gctgcccgaaagacgacctccaagattcgctctcacaaaccacgtctgatcgactctatc
aaaggcgactcgcacggacccggacccggtcccagtcgttcctcaacgcttgcacaaagg
ctgggttcctcggctgatcccctcagcatccgaggcgccgcacgtcccaccccggcaggt
cgtgttcgcaggaacgccatctccctcaatggtacacgggtcgagccaaagggacggccg
atgacggccgtgcggccactggaggtttggagagagtttgttaacaggagatacaaccca
gagtccaggtttctgaacctcgagcgaatgtctgaggacgaagaactcggaaaagctcgg
gtcctgccacctggcgtgcccggggcgaacgggagagaagccgccgtcatcttcaagctt
gccgcttcattgaagccaccggtcaagacggtgtctctagcgaacaacaacttgcacacc
tgccatgcgctctcgactcttcctcactacctccccgacctcgccaatctatcgctagag
aacaataatatcaagcgcttcaccgacctcgaccatatcaacatgaataccgacaagacg
gataagttcaagtgcctacgcgaattcatcctgctcggaaaccccctccgaacgaacgac
gaatcgcacgggcgaatggacacatacaagaacaacatgcttcgacggttccccacgcta
gagatgctggacaaagaaccggtaacgaagatcgcgttcgacgggcccagcacatcgaaa
gcaccacacaccggtcctcggcctatagccaccaccttcccgtcccaaatgatgcccgcc
ttcgtagtcggcgtcgacggcgccctcgtcagctccttcttctccaggttttttcccctc
ttcgacacgcagcgttcagcactcctcgacgcctactccgactccgcaaccttctccttc
caagccaacacctccatccccgcccgcgcgcgcattcaaggcttccaatactcgaaggaa
atgccacaccagcgcaacctcgagtggtccacctggctcggcgcgggccacggcggctcg
cgcaatctgagtcggatcgcgaacgcggtggagaagatggtgaagagcatgcatgtggga
agagaggcggtgattggcgcgttggaggcgttgccgaggacgaggcatgagatggaggga
gagggtgccggggagaggttttgtgtggatgggtggccggtgcagcagggggagatggcg
tgtttgtttttgtcgatacatgggcagtttgtggaattgccgaccgaaggtgtccgctcc
ttcgaccgatcgttcatcctagcactagctcccgcaggctcaagagcgaaactcgcaggc
tgggacgtcgagatcctttccgaccaactcgtcgtgcggaactactcgagccacgaagcg
tggaaacccggtcctttactcgttcaggcgccggatccttcttcgtcttccacgtcttcg
tcttcggtgcctacaacgagcgcggcggggacggcggcgccgctttcggtgttgcagatt
ccgccggtggtgcaggaggcgttgaatcctatccccgagccacaacgttccctggtgctg
caggtgtgtcagcggacgggcttgacggtccagttcgcggtggagtgtttggcggggaat
ggatgggaattggataaggcgttggcgaattttgagcaggttaagagcacgcttggacgg
gaggcgtttttgactttgtga
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integrated database retrieval system
