Shewanella sp. W3-18-1: Sputw3181_1364
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Entry
Sputw3181_1364 CDS
T00453
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Sputw3181_1364
Enzymes [BR:
shw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sputw3181_1364
Peptidoglycan biosynthesis and degradation proteins [BR:
shw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sputw3181_1364
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
LysR_substrate
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ABM24207
UniProt:
A1RHR2
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All DBs
Position
complement(1546209..1547642)
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AA seq
477 aa
AA seq
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MTRFLLIIILGFLLTACQQVTVDEPEFVPHQLTELRVGTLYGPQIYMTSGQGNSGFDYDM
ALRFAEYLNVPLKMVPYTNRSELYDALKKNDIDIIAAGMTETPARREQFRLGPPLYRVNQ
VLVYREGVAAPKDISKLKGRITIIADSAFVETLTQLQKHHPSLVWDQVTDKDSEELLAMI
ANKEIDYTIADSSSVQINRRYLPDLRSGPVLEEKLDVVWLLPPTHSDALMSQLLAFWHQE
KLAGTLDHLNEKYFGHVKRFDYIDTRAFLRAIETVLPRYRQLFETHAGDLDWRKLAATSY
QESHWNPHARSPTGVRGMMMLTEPTAKEIGITNRLDAEESIRGGAAYLRDMINRLPESIP
ESQRMWFALASYNIGYAHVEDARKLAESMELNPNAWRDLKKVLPLLQKRKYYQKTRYGYA
RGSEAVHYVDSIRRYYDTLVWVDNQSKQPMPEDEQNDLIAEELPSMPAGSLSPDQPK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatttctgcttattatcatcttaggtttcttactgactgcctgtcagcaggtg
accgtggacgaaccagaattcgttcctcatcagctcactgaactgcgagtgggaaccctt
tatggccctcagatctatatgacatccggccaaggaaatagtggatttgactacgatatg
gcgctgcgatttgccgaatatctcaacgtccccttaaaaatggtgccttatactaaccgc
tcagagctctatgacgccctaaaaaagaatgatattgatattattgccgcaggtatgaca
gaaacgcctgcgcgaagagaacaattccgtctaggcccacctttatatcgcgttaatcaa
gtgctcgtttatcgagaaggcgtggcagctcccaaagatatcagcaagttaaaaggaaga
atcactatcattgctgactcagcgtttgtagagacattgactcaactgcaaaaacatcat
ccgagtttagtctgggatcaagtaacagataaagacagtgaagagttgctggcgatgatc
gcgaataaagaaattgattacaccatcgccgactccagcagtgtgcaaattaaccgtcgt
tatctacccgatttacgttctggccctgtgcttgaagaaaaactcgatgtggtctggtta
ttaccaccgactcacagcgatgcacttatgagccaattattggctttctggcatcaagaa
aagctcgcagggacgctcgatcatctcaatgaaaagtattttggccacgttaaacgtttc
gattatatcgatactcgtgctttcctgcgtgctatcgaaacagtccttcctcgttatcgt
caactgtttgagacccatgcaggtgatttagattggcgtaaacttgcagcaacaagttac
caagaatcccactggaatccgcatgcccgctcccccacgggagtccgtggcatgatgatg
ctcacagaacccacagccaaagaaattggcatcactaaccgcctcgatgcagaagaaagt
atccgcggaggcgccgcatatctaagggatatgattaaccgtttgcccgaatccatccct
gaaagtcaacgtatgtggtttgcactagcctcttacaatatagggtatgcccatgtggaa
gatgcgcgaaaactcgcagaatcaatggaattaaatcccaatgcttggcgagatctaaag
aaagttttacctctactacaaaaacggaaatattaccaaaaaacccgttatggttatgct
cgtggcagtgaagctgtacattacgtggatagtattcgccgctactacgatacattggtg
tgggtggataatcagtcaaaacagcctatgccagaggacgagcaaaacgatcttattgct
gaagaactccccagtatgcctgcaggctcccttagcccagatcaacctaaataa
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