Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_4837
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Entry
SHJG_4837 CDS
T02063
Name
(GenBank) ECF-family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shy03021
]
SHJG_4837
Transcription machinery [BR:
shy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHJG_4837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
DUF4440
Motif
Other DBs
NCBI-ProteinID:
AEY90106
LinkDB
All DBs
Position
complement(5565911..5566843)
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AA seq
310 aa
AA seq
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MTDHAFLAERFEAHRGHLRAVAHRMLGSAAEAEDAVQEAWFRLSRSDTGGVENLGGWLTT
VVGRVCLDMLRSRRSRGEQPLETWRPAPSAEPDPVQDALLADSVGPALLVVLDTLSPAER
LAFVLHDLFGVPFEEIGGILGRSPAAARQLASRARRRVRGVRAPEADLARQRQVVDAFLA
AARNGDFDGLLEVLDPEVEARTEGGVNSGAARVAAAAASFARLARVARPVLVDGATGLAV
FADGRPERVLAFTFVAGRIAVIDIITGPARLADLTVEELPLGTGPVQDRSSTPTVWSPLV
SPFFRKPRRR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacgcattcctcgccgagcgcttcgaggcccaccgggggcatctgcgggcc
gtcgcccaccggatgctcggctccgccgccgaggccgaggacgccgtccaggaggcgtgg
ttccggctgagccggtccgacaccggcggggtggagaacctcggcggctggctgacgacc
gtcgtcggccgggtctgcctcgacatgctccgctcccgccgctcccggggcgagcagccg
ctggagacctggcggccggcgccgtccgccgagccggacccggtgcaggacgccctgctc
gccgactcggtcgggccggccctcctcgtcgtcctggacacgctctccccggccgagcgg
ctcgccttcgtgctgcacgacctgttcggggtgcccttcgaggagatcggcggcatcctc
ggccgcagcccggccgcggcgcggcagctcgccagccgggcccggcgccgggtgcggggc
gtgcgggcgccggaggccgacctggcccggcagcggcaggtggtggatgccttcctggcc
gccgcgcggaacggcgacttcgacgggctgctggaggtgctcgaccccgaggtggaggcc
cgtaccgagggcggggtgaacagcggtgcggcccgcgtcgccgccgccgcggcgagcttc
gcccgtctggcgcgcgtcgcgcgtccggtgctggtcgacggcgcgaccggactggccgtg
ttcgccgacgggcgcccggagcgggtcctggccttcaccttcgtcgccggccgcatcgcg
gtgatcgacatcatcaccgggcccgcccggctggcggacctcaccgtggaggagctcccg
cttggcacgggcccggttcaggacaggtccagcacccccaccgtctggtccccgctcgtc
tcgccgttcttccggaagcccaggcggaggtag
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