Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_6434
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Entry
SHJG_6434 CDS
T02063
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00300
Lysine biosynthesis
shy00470
D-Amino acid metabolism
shy01100
Metabolic pathways
shy01110
Biosynthesis of secondary metabolites
shy01120
Microbial metabolism in diverse environments
shy01230
Biosynthesis of amino acids
Module
shy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHJG_6434
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHJG_6434
Enzymes [BR:
shy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SHJG_6434
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AEY91701
LinkDB
All DBs
Position
7322970..7324361
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRHADVLPEGHYSAPPADLNVLDQKVWAQTVTRGDDGVVTVGGIPVSRLAE
EFGTPAYVLDEADFRSRARAWRTAFGPDADVFYAGKAFLSRAVVRWLNEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSVAEITRAVEAGVGRIVLDSFQEIVRVAHIAQELGTRQ
RVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLELIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALT
EIVTRECEAARLRTPRISVEPGRAIVGPTAFTLYEVGTVKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRASDAEPMLARVVGKHCESGDIVVKDAFLPSDLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVRDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgccacgccgatgtcctgcccgaggggcac
tactccgcgccgcccgccgacctcaacgtcctggaccagaaggtgtgggcccagaccgtc
acgcgcggcgacgacggtgtggtcaccgtcggcgggatcccggtcagccggctcgccgag
gagttcggcacccccgcctacgtcctcgacgaggccgacttccggtcccgcgcgcgtgcc
tggcgtaccgcgttcgggccggacgccgatgtcttctacgccgggaaggccttcctctcc
cgggccgtcgtgcggtggctgaacgaggagggcctcaacctggacgtctgctccggcggc
gagctcgccaccgcgctgtccgccgggatgcccgccgagcgcatcgccttccacggcaac
aacaagtccgtcgcggagatcacccgggccgtcgaggccggtgtcgggcggatcgtgctc
gactccttccaggagatcgtgcgggtcgcccacatcgcccaggagctgggcacccgccag
cgcgtccagatccggatcaccgtgggcgtggaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcgggattccgctggccggggggcaggccgccgaggccgta
cggcgggccctccagctcgacgggctggagctgatcgggatccactcccacatcgggtcg
cagatcttcgacatgtcgggcttcgaggtcgccgcccaccgtgtcgtcggactgctcaag
gacatccgggacgagcacggggtcgagctgccggagatcgacctgggaggcgggctcggg
atcgcctacaccagcgacgacgacccccgggagccgcacgagatcgccaaggcgctcacc
gagatcgtcacgcgggagtgcgaggccgcccggctgcgcacgccccggatctccgtcgag
cccgggcgcgccatcgtcggcccgaccgccttcacgctgtacgaggtcggcacggtcaag
ccgctcgacgggctgcgcacgtacgtctccgtcgacggcggcatgtcggacaacatccgg
accgcgctgtacgacgccgagtacagcgtcgccctggtgtcccgcgcgtccgacgccgag
ccgatgctcgcccgtgtcgtcggcaagcactgcgagagcggggacatcgtggtcaaggac
gcgttcctgccctcggacctggcgccgggcgacctgatcgccgtaccggccacgggggcg
tactgccggtccatggccagcaactacaaccacgtgctgcgcccgcccgtcgtcgccgta
cgggacggcgaggcgcgggtgatcgtccgccgggagacggaggaggacctcctgcgtctc
gacgtcgggtga
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