Sphingobium xenophagum: CJD35_21570
Help
Entry
CJD35_21570 CDS
T05146
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shyd03021
]
CJD35_21570
Transcription machinery [BR:
shyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJD35_21570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
HTH_28
Xre-like-HTH
DUF134
HTH_24
HTH_1
HTH_3
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ASY47062
UniProt:
A0A249N0L7
LinkDB
All DBs
Position
p4:complement(3942..4517)
Genome browser
AA seq
191 aa
AA seq
DB search
MSIDWTALSDGELATLSIAGRQAAFAEIMRRYRQPVFRLARASVGETDEALDLVQETFVA
AHQALPRYDTQRAMKAWLSTIAINKCRDWARKRAVRRFLSFGFAAEDQADTLPDNAVPID
DSAADRQELDRVTRAISTLPVNLKEPLVLRTIEGLSQAETAEVLGISQKAVETRLYRARA
QLMEKLNAAKG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgactggaccgcattgtctgacggcgaactggcgacgctcagtatcgccggc
cgtcaggcggcctttgcggaaatcatgcgccgttaccgtcagccggtttttcggctcgcg
cgtgcctctgtaggcgaaaccgatgaagcgcttgatctggttcaggaaacctttgttgcc
gcgcatcaggcgttgccgcgctacgacacgcagcgcgcgatgaaggcatggctgtcgacg
atcgcgatcaacaaatgccgggattgggcgaggaagcgcgccgttcgccgttttctgtcc
ttcggcttcgcggcggaggatcaggctgacacccttcccgacaacgccgtgccgatcgat
gacagtgcagccgatcgccaggagcttgatcgggtgacgcgcgctatctcgacgttgccg
gtcaatctgaaggagccgctggtgctgcggacgatcgagggcttgagccaggcggagacg
gccgaggtgttgggtatcagccagaaggcggtcgaaacccgcctttatcgcgcgcgggcg
cagctcatggaaaagttgaacgcggctaagggatga
DBGET
integrated database retrieval system
