Shinella sp. HZN7: shn_14585
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Entry
shn_14585 CDS
T04278
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_14585
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
shn_14585
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ANH05142
UniProt:
A0A1A9G2D6
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Position
3013957..3014832
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AA seq
291 aa
AA seq
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MRYVQLRAFHNVAIHGGFSRAAEALFLTQPAVSDQVRKLEEEYDVLLFNRNKKQVTLTQA
GQQLLEITRRMFDVEQQALDLLSESRALRAGKLRIVADAAHHLLHILAAFRRAYPSVQVS
IDAGNTETVITSLHAYEADIGVLGEIPQSSDFEILKLNSTPIIAFASRDYLLAGQETVTF
RELANHPLVMRERGSKTRQKLEAMSEQCGVPLTPLIEAEGREAVREIVAAGGGVGFVSSA
EFGQDSRLVPIRIDAPEMLMDEALICLRERSNGKLVNAFFDVARQLVPSPA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgtgcaactccgcgcctttcacaacgtggccatccatggcggcttttcgcgc
gccgccgaggccctgttcctcacccagccggccgtgtcggaccaggtgcgcaagctggaa
gaggaatacgacgtcctgctcttcaaccgcaacaagaagcaggtgacgctgacccaggcc
ggccagcagctccttgaaatcacccgccgcatgttcgacgtcgagcagcaggcactcgac
ctcctgtcggaatcgcgggcgctgcgggcgggaaagctgcgcatcgtcgccgacgccgcc
caccatctcctccacatcctcgccgcctttcgccgcgcctatccctcggtgcaggtctcg
atcgacgcgggcaacacggagacggtcatcaccagccttcatgcctacgaggccgatatc
ggcgtgctgggcgagatcccgcagtccagcgacttcgaaattctcaagctgaattcgacg
ccgatcatcgcctttgcaagccgcgactatctcctcgcgggccaggagacggtgaccttc
cgggaattggcaaaccaccccctcgtcatgcgcgagcgcggctccaagacccgccagaag
ctggaggccatgtcggaacagtgcggcgtgccgctgacgccgctcatcgaggccgaaggc
cgcgaggccgttcgcgagatcgtcgcggcgggcggcggtgtcggtttcgtctcctcagcc
gaattcggccaggacagccgcctcgtccccatccgcatcgacgccccggaaatgctaatg
gacgaggctctcatctgcctgcgcgagcgcagcaacggcaagctcgtgaatgccttcttc
gacgttgcgcgccagctcgtgccttctccggcatga
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