Streptococcus intermedius B196: SIR_1626
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Entry
SIR_1626 CDS
T02830
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sib
Streptococcus intermedius B196
Pathway
sib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SIR_1626 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sib03019
]
SIR_1626 (groL)
03110 Chaperones and folding catalysts [BR:
sib03110
]
SIR_1626 (groL)
03029 Mitochondrial biogenesis [BR:
sib03029
]
SIR_1626 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sib04147
]
SIR_1626 (groL)
Enzymes [BR:
sib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SIR_1626 (groL)
Messenger RNA biogenesis [BR:
sib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SIR_1626 (groL)
Chaperones and folding catalysts [BR:
sib03110
]
Heat shock proteins
HSP60 / Chaperonin
SIR_1626 (groL)
Mitochondrial biogenesis [BR:
sib03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SIR_1626 (groL)
Exosome [BR:
sib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SIR_1626 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SIR_1626 (groL)
Exosomal proteins of breast cancer cells
SIR_1626 (groL)
Exosomal proteins of colorectal cancer cells
SIR_1626 (groL)
Exosomal proteins of bladder cancer cells
SIR_1626 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Exonuc_VIII
Motif
Other DBs
NCBI-ProteinID:
AGU76973
UniProt:
T1ZGB6
LinkDB
All DBs
Position
complement(1718884..1720506)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIE
TAVATAVEALKANSVPVSNKEAIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESKG
METELDVVEGMQFDRGYLSQYMVTDNEKMVADLDNPYILITDKKISNIQEILPLLENILK
TSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLELKDATIEALGQASKVTVDKDSTVIVEGSGAAEAIANRVAVIKSQIESATSEFDK
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTAFVNV
LDAVAALELEADEATGRNIVLRALEEPVRQIALNAGFEGSIVIDRLKNSEVGTGFNAATG
EWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAVVASQPEPASPAPAMDPSMMGGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcagcagatgcaagaagtgctatggtacgtggtgtcgat
attttagcagataccgttaaagtaaccttaggacctaaaggacgcaatgttgttcttgag
aaatcatttggctcacccctcatcacaaatgacggtgtgactattgccaaagaaattgaa
ctcgaagatcattttgaaaatatgggcgctaagttggtgtcagaagttgcttcaaaaact
aatgatatcgctggtgacggaacaactactgcgactgtcttgacccaagccattgtccgc
gaaggaatcaaaaatgtaacggctggtgcaaacccaattggcattcgtcgtggtattgaa
acagctgttgcaacagctgttgaagctttaaaagcaaattctgttccagtttctaataaa
gaagcgattgcacaagttgcagctgtctcatcacgttctgaaaaagtcggagaatacatc
tctgaagccatggaaaaagttggcaacgacggtgtcatcactattgaagaatcaaaagga
atggaaacagagctagatgttgttgaaggtatgcagtttgaccgtggctatctttctcaa
tacatggtaacagacaatgaaaaaatggttgctgatttagataatccatatatcttgatt
acagataagaagatttctaatatccaagaaattcttcctttattggaaaatattttaaaa
acaagtcgtccacttttgattatcgcagatgatgtagacggtgaagctctcccaactctt
gtgttaaataaaatccgcggtactttcaatgtagtcgctgtaaaagcgccaggatttggt
gaccgtcgtaaggctatgttggaagatattgcgattctgactggcggtacagtgattaca
gaagatcttggtctggagttgaaagatgcaaccattgaagcacttggccaagcctcaaaa
gtgactgtcgacaaagatagcacagtgattgtggagggttcaggagctgctgaagcgatt
gctaaccgcgtggctgtcattaaatcgcaaattgaaagtgctacttctgaatttgataaa
gaaaaactacaagaacgtttggcgaaattatcaggtggtgtggctgtcatcaaagtaggt
gctgcaacagaaacagaactcaaagaaatgaaactccgcattgaagatgctctcaatgca
actcgcgccgctgtcgaagaaggaattgtctcaggtggtggaacagcttttgtgaatgtt
ttggatgcagttgctgctcttgaactggaagctgatgaagcaacaggtcgcaatattgtt
cttcgtgctttggaagaaccagttcgtcaaatcgctctcaatgctggatttgaaggttct
atcgtcattgatcgtttgaaaaactctgaagttggtacaggatttaatgctgcaactggt
gaatgggtcaacatgattgaagcaggtatcattgacccagtcaaagttactcgttctgcc
cttcaaaacgcagcttcagtagctagccttattttaacaacagaagcagttgttgctagc
caaccagaaccagctagcccagctcccgcaatggatccaagcatgatgggcgggatgatg
taa
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