Streptococcus intermedius JTH08: SCIM_0667
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Entry
SCIM_0667 CDS
T02156
Symbol
rmlB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00521
Streptomycin biosynthesis
sie00523
Polyketide sugar unit biosynthesis
sie00525
Acarbose and validamycin biosynthesis
sie00541
O-Antigen nucleotide sugar biosynthesis
sie01100
Metabolic pathways
sie01110
Biosynthesis of secondary metabolites
sie01250
Biosynthesis of nucleotide sugars
Module
sie_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SCIM_0667 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SCIM_0667 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
SCIM_0667 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SCIM_0667 (rmlB)
00525 Acarbose and validamycin biosynthesis
SCIM_0667 (rmlB)
Enzymes [BR:
sie01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SCIM_0667 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
BAM23321
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Position
777046..778092
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AA seq
348 aa
AA seq
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MTEYKNIVVTGGAGFIGSNFVHYVYNNFPDVHITVLDKLTYAGNRANIEEILGDRVELVV
GDIADADIVDQVAKNADAIVHYAAESHNDNSLNDPRPFIDTNFVGTYTLLEAARKYNIRF
HHVSTDEVYGDLPLREDLPGHGEGPGEKFTPETKYNPSSPYSSTKAASDLIVKAWVRSFG
VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSAGVWTI
LTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADAYDHVTDRAGHDLRYAIDASKLRD
ELGWKPEFTNFEAGLKETIKWYTDHQNWWKAEKEAVEANYAKTQKVLK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatataaaaatattgtagtaacaggtggagcaggatttatcggttctaacttt
gttcattatgtgtacaataacttcccagatgtgcatatcacggttctggataagctaact
tatgctggtaatcgagctaacattgaagaaattctaggcgatcgagtggagttagttgtg
ggagacattgcagatgcagatattgttgaccaagtagctaagaatgcggatgctattgtt
cactatgcagcagaaagtcataatgacaattcgctaaatgaccctcgtccatttatcgat
acgaactttgttggaacttatacgcttcttgaagcagctcgtaaatacaacattcgtttc
caccatgtgtcgactgacgaagtttacggagatcttcctcttcgtgaagatcttccaggg
cacggtgaaggaccgggtgaaaaattcaccccagaaacgaaatacaatcctagttcgcct
tattcatctaccaaggcagcttcagacttgattgttaaagcttgggtacgctcatttggc
gtgaaagcgactatttctaactgttcaaacaactatggtccttaccagcacatcgagaag
ttcattccacgtcaaattactaatattctgagtgggatcaaaccaaaactctacggtgaa
ggaaagaatgttcgtgactggattcatacaaatgatcattcagcaggtgtttggacgatt
ctgaccaagggacagatcggtgaaacttacttgattggtgctgacggtgagaagaacaat
aaggaagtactggagctcattctcaaagaaatgggacagcctgctgatgcttatgatcat
gtgacagatcgtgctggtcacgaccttcgctatgcgattgatgctagcaagttgcgggat
gaactgggctggaaaccagaattcactaactttgaagctggattgaaagaaacaatcaag
tggtacacagatcaccagaattggtggaaagctgaaaaagaagctgtcgaagccaactat
gctaagactcaaaaagtgttgaaataa
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