Streptococcus ilei I-G2: N596_08295
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Entry
N596_08295 CDS
T02879
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sig
Streptococcus ilei I-G2
Pathway
sig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N596_08295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sig03021
]
N596_08295
03400 DNA repair and recombination proteins [BR:
sig03400
]
N596_08295
Enzymes [BR:
sig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N596_08295
Transcription machinery [BR:
sig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N596_08295
DNA repair and recombination proteins [BR:
sig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N596_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
NusG_add
Motif
Other DBs
NCBI-GeneID:
17316891
NCBI-ProteinID:
AGY40737
LinkDB
All DBs
Position
1700225..1703794
Genome browser
AA seq
1189 aa
AA seq
DB search
MAGHDVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDHGLKEVFEDVLPISNFTD
TMELEFVGYEIREPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVRNTVEKDIHKNPMDSRTDEALKE
IYERLRPGEPKTAESSRSLLVARFFDPRRYDLAPVGRYKINKKLNIKNRLLNQTIAEPLV
DAETGEILVEAGTVMTRDVIDSISEHLDGDLNKIVYTPNDSAVLTEPVVLQKFKIVAPTD
PDRVVTIIGNANPDDKVRTITPADILAEMSYFLNLAEGIGRVDDIDHLGNRRIRAVGELL
ANQVRLGLSRMERNVRERMSVQDNEVLTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKVDREKGVVTNEIVWLTADEEDEYIVAQSNSKLNEKGGFAEPIVMGRH
RGNNQEFPSDQVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQHDGKVTYADADKVEVRREDGSLDVYHIQKFRRSNSGTAY
NQRTLVKVGDVVEKGDFIADGPSMEKGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIRVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTILYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSMVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVNGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDKEVELRDLDEGEDDDVIHVDDLEKAREKAAKEARAAFEAEGKED
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgacgttcaatacgggaaacatcggacccgtcgtagtttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaatccaaacggattcatttaaagatttt
ctggatcatggtttgaaagaagttttcgaagatgtattgccaatttcgaacttcacagac
acaatggagttggaattcgtcggctatgaaatcagagaaccaaagtataccttggaagaa
gcacgtatccatgatgcgagctattctgccccaatctttgtaaccttccgcttggtcaac
aaggaaacaggcgaaatcaaaacgcaagaagtcttctttggtgatttcccaatcatgacc
gagatgggaacctttatcatcaatggtggagagcggatcatcgtatctcagctcgtgcgt
tcaccaggtgtctacttcaatgataaggtggacaagaacggtaaggttggctatggatca
acggttattccgaaccgtggagcttggctagaacttgaaacagactcaaaagatattgct
tatactcgtatcgaccgtacgcgtaagattccatttacgaccttggttcgtgcccttggt
ttctctggggatgacgagatttttgatatctttggggatagcgaattggttcgcaacaca
gttgaaaaagatatccacaaaaacccaatggattctcgcacagatgaagcccttaaagaa
atttatgagcgtcttcgtccaggtgagccaaaaacagcggaaagctctcgtagcttgttg
gtagcccgtttctttgacccacgtcgttatgacttggctccagttggtcgctacaagatc
aataagaaactcaatatcaagaaccgtttgttgaaccaaacgattgcagaaccattggta
gatgctgaaacaggagaaatccttgtagaagctggtaccgtgatgacacgcgatgtcatc
gacagcatctcagaacatttggacggtgatttgaacaagattgtctacactccaaatgat
tcagcagtattgacagaaccagtcgttcttcaaaaattcaagattgtggcaccaacggat
ccagaccgcgttgtcactatcatcggcaatgctaatccagatgataaggttcgtaccatc
actccagctgatatccttgctgagatgagctacttccttaacttggctgaaggtattggc
cgcgtggatgatatcgaccaccttggaaaccgtcgtattcgtgccgttggtgaattgctt
gccaaccaagtgcgtcttggactttcacggatggaacgtaacgttcgtgaacggatgtct
gttcaagataacgaagtattaacacctcaacaaatcattaacatccgtccagtaactgca
gcaatcaaagaattctttggttcttcccaattgtcccagttcatggaccaacacaaccca
ctttctgagttgtcccacaaacgtcgtttgtctgccttagggcctggtggtttgacacgt
gaccgcgctggatatgaagtccgtgacgtgcactacactcactatggtcgtatgtgtcca
atcgaaacacctgaaggaccaaacatcggtttgatcaacaacttgtcatcctatggacac
ttgaacaagtatggtttcatccaaacgccataccgtaaagtagaccgtgaaaaaggtgtg
gtcaccaacgaaatcgtttggttgacagctgatgaagaagatgagtacatcgtagcccag
tccaactctaagttgaacgaaaaaggtggttttgctgagccgatcgttatgggacgtcac
cgtggtaacaaccaagagttcccatctgatcaagtcgactacatggacgtatctccaaaa
caggtagttgccgttgcgacagcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgatcgatccaaaagcgcct
tacgtgggtactggtatggaataccaagcagcccatgactcaggagctgcagtcattgcg
caacatgatgggaaggttacttatgccgatgctgacaaggtagaagttcgtcgggaagat
ggatctcttgatgtttaccatatccaaaaattccgtcgttcaaactcaggtacggcttac
aaccaacgtacccttgtaaaagttggcgatgtcgttgaaaaaggcgactttatcgcagac
ggtccatcgatggaaaaaggggaaatggcccttggtcaaaacccaattgttgcctacatg
acatgggaaggttacaacttcgaggatgccgttatcatgagcgaacgcttggtgaaagaa
gatgtctatacatctgttcacttggaagaattcgaatcagaaacgcgcgacactaagtta
ggccctgaagaaatcactcgtgaaattccaaacgttggggaagatgctctcagaaacctt
gacgaaatgggtattatccgtatcggtgcggaagtaaaagaaggcgatatcttagttggt
aaggtaacaccgaagggtgaaaaagatctttctgctgaagaacgtctcctccacgctatc
tttggagataaatctcgtgaagtgcgtgatacttctcttcgtgtacctcacggtggagat
ggtgttgttcgcgatgtcaagatctttacgcgtgcaaacggagatgaattgcaatcgggt
gtcaacatgttggttcgtgtttacatcgcacaaaaacgcaagatccgcgtcggagataag
atggccggtcgtcacggaaacaaaggggttgtatcccgtattgttcctgtggaagacatg
ccttaccttccagatggtacaccggttgatatcatgttgaacccacttggggtgccatca
cgtatgaatatcggtcaggttatggaacttcaccttggtatggcggctcgtaacttgggt
atccacatcgcaacaccagtctttgacggagcaagctcagaagacctctgggataccgtt
cgtgaagctggtatggatagcgatgctaagaccattctttacgatggccgtacaggtgag
ccatttgacaaccgtgtttctgtcggtgtcatgtacatgatcaagcttcaccacatggtt
gatgataaactccacgctcgttctgtcggaccatactcaatggttacccaacaaccactc
ggaggtaaagctcagtttggtggacaacgtttcggggaaatggaagtttgggcccttgag
gcttatggtgcgtctaatgtccttcaagaaatcttgacctacaagtcagacgatgtcaac
ggacgtttgaaagcttatgaagcgattaccaaaggaaaaccaattccaaaaccaggtgtg
ccagagtccttccgagtacttgtgaaagaattgcaatcacttggattggatatgcgtgtc
ctagatgaagatgacaaagaagttgaacttcgcgaccttgacgaaggggaagacgacgat
gttatccacgtagatgatctagaaaaagcacgtgaaaaagcagctaaggaagctcgcgca
gctttcgaagctgaagggaaagaagattaa
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