Ruegeria pomeroyi: SPO3472
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Entry
SPO3472 CDS
T00215
Name
(GenBank) polyamine ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO3472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO3472
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SPO3472
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
AAA_25
nSTAND3
DO-GTPase2
Ctf8
Motif
Other DBs
NCBI-ProteinID:
AAV96698
UniProt:
Q5LMU0
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All DBs
Position
3676157..3677275
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AA seq
372 aa
AA seq
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MYGELALTTRTSSDTFVEFERVQKSYDGETLVVKDLNLTMPKGEFLTMLGPSGSGKTTCL
MMLAGFETATHGEIKLDGRPINNIPPHKRGIGMVFQNYALFPHMTIAENLSFPLEVRKIG
KSDREAKIKRALDMVEMGAFGGRRPAQLSGGQQQRVALARALVFEPELVLMDEPLGALDK
QLREKMQFEITRLAHELGITVVYVTHDQTEALTMSDRVAVFNDGVIQQLAPPDELYEQPA
NSFVAQFIGENNTLEGEVQEIRDGIAVVRLDDGGLIDCKPVNVSRPGERTRVSIRPERVE
FNKSRLQKGVHTLKAEVMEFIYMGDIFRTRVRVAGNDEFIIKTRNAPDQVRLEPGAQIEI
GWLPEDCRALDA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtacggggagctggcattgaccacacgcaccagcagcgacacgttcgttgaattcgaa
cgtgtccagaagagttatgacggcgaaacgcttgttgtaaaagacctcaatctgaccatg
cccaaaggcgagtttctgacgatgctcggcccctcgggttccggtaagacaacctgtctg
atgatgctggccggctttgaaaccgccacccatggcgagatcaagctcgacgggcgtccg
atcaacaacatccctccgcacaaacgcgggatcggcatggtgttccagaactacgccctg
ttcccgcacatgacgattgccgagaacctgtcctttccgctggaagtgcgcaagatcggc
aaatccgaccgcgaggccaagatcaagcgcgcgttggacatggtcgagatgggcgccttt
ggcggccgccgcccggcccagctctcgggtggccagcaacagcgggtcgcattggcccgc
gcgctggtattcgaaccggaactggtgctgatggacgaaccgctgggcgcgctggacaag
cagctgcgcgaaaagatgcagttcgaaatcacccgtctggcgcatgagctgggaatcacc
gtggtctatgtgacccatgaccagaccgaggcgctgaccatgtcggaccgcgtcgcggtg
ttcaacgatggcgtgatccagcagctggcgccgcctgacgagctttatgaacagcctgcc
aacagcttcgttgcccaattcatcggcgagaacaacaccctcgaaggtgaggtgcaggag
attcgcgacggtatcgcagtggtccggctcgacgatggcgggctgatcgactgcaaaccg
gtcaatgtcagccgcccgggcgaacgcacccgcgtgtcgatccgccccgaacgggtcgaa
ttcaacaagagccgcctgcaaaaaggtgtccacacgctcaaggccgaggtgatggaattc
atctacatgggcgacatcttccgcacccgcgtgcgcgttgccggtaatgacgaattcatc
atcaagacccggaacgcgcccgaccaggtgcggctggaacccggcgcccagatcgagatc
ggctggctgcccgaagattgccgcgcgctggacgcctga
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