Setaria italica (foxtail millet): 101773462
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Entry
101773462 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC101773462
KO
K19026
spatacsin
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101773462
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101773462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
CCD
DC_STAMP
Motif
Other DBs
NCBI-GeneID:
101773462
NCBI-ProteinID:
XP_022680596
LinkDB
All DBs
Position
III:complement(8448131..8479627)
Genome browser
AA seq
2890 aa
AA seq
DB search
MMETDSESPQSFFSSLPLAEASCSCQWECLKVLSSSSGYLIGLVLTPNDSVTCEAHPCNT
ECILIAVLELNQWGIQWNFVADLQDVRDGVKASPKWVDFQLSDMFLACLNATGFVAIWNV
KTGGLATSFSVLQQCRTGLEMPTRSSMPDVTNLHGGNISVESFAGRMFKRLVLASYSHLL
AVVDEVGVVYVFYADDTLNFKANVLENFDLSVTNHFGDCLSAWEAAGHEIGSLSFSTHQS
IRQGSLNPAKLVPEVSWKNDVGIVRPRKRRKCRCDENEVDSWPSGFVTTGQMKVGPAYPD
TLNSSSTLRRILLPPCRSYEDVISLSPLGLTRIFKGSNADGNEHVKIFHTELLMYSSFLG
ERDIDVGFMDKRLPFKKDSAFVGDSVVCCCQGYLYLITQNGLSVVLPPVSISSFSSHGDA
IKFWQPGFAVGSACNALNLLSVERSETRWKPWQIEVLDRALLYEGPALADRLCWENGWDL
KVSRLRWLQLALHYSMIADLEQSLDMLAEVNLAEEGVLQLLLASIHRLSGRSGSDNEVAV
SSRLMVLAVRFATRMIKCYGLQKQNTDMPDNSVKLHEMSSLLMVIRSIQHRVSAKNQNSV
RMGDDKNSLKIGTELLQNDSSLSVVVVDGLSSGLSGGLDAHDRQESAHVLVPDSDSLLAL
APAESSLSASNFHDINTNKGTAQDGRQIIQGNIKEMINRWEMNNFDLKTVVREALQSGRL
PLAVLQLQLLRQRELVSNEDSEDAFSEVHEIGRSIVYDLLMKGKTELAVATLERLGDDVE
SDLRQLMQGTVRRSLRLQIADEMKKRGFIRSSEWKMLETITLIERFYPSSSFWDTYFVRE
NVIRDAAKIVTLPGEDKPALSLHIRNQPLIECGDVDGTVLGSWVNIDDYTDSKESSGSNI
SDGYWACAAVWSDAWDQRTVDRILLDQPYHVHAHIPWESQFEYFVGHNDAGKVCELLDMI
PNSVLLEGIIRVNVDSLQAADNTVSDLTVPDYNMYICDSEELEPVCMEIPHVKVFRSLYN
HESTSYIRMLIQQELAKKHIFVKEYWKSTTEIIPLLARAGMLIKVGPRKEYSTTFSASEM
PDDANFQGREGALHKLVIRFCVQYNLPYLLELYLDNCNLAPEKDCIPLLKDAAGDCKWAQ
WLLFSRIKGLEYEASFSNARWNLSQKMINSSNLTAIEIDEMLYTVDDMAERIGEMSALAT
LMYASAPIQKSICTGSVNRSRGLPSQCTLENLGPCLQQFPTLWKTLYSACFGQGEYGCLN
YSPANVFGKSSISEYLRWRYSIFSSAGGDTSLLQMVPCWVPKSIRRLIQLFEQGPFGMQL
LSSAPPSEELFTHSVTDYIYNSTGYTDANALSLEASIQKSVEEELYSSLEEKDVRVEHHL
HRGRALAAFRHLLVKRASQLKSASACQVIPAQSNVQADVQLILAPLSQAERSILISVAPL
AITNFEDSALVASCIFLLELCGLCANMLRLDIAALRRISSYYKSVQQKKHFDLSSPKAPE
LHMQSHGADIAPALARALAEDYVQSDHLHVLEQTQTSMAPKREQTPQPLIAILQHLEKAS
LPSLDEGKTCGFWLLTGIGDASVYRSQQNEASQHWNLVTEFCQAHHLPLSTKYLALLAND
NDWVGFLTEAQIAGFPIEVVIEVAAKEIRDSRLRTHILTVLKNMMSLRRKSSGNIPSGSS
DSSFSAVDGNNPVELFGILGVCEKQKNPGEALLNKAKQMQWSLLAMIASCFPDVTPLSCL
SVWLEITAAREMSSIKVDDISSKIAKNVESAVVATNKLPGTCRNVEFRYNRKNPKRRRFL
EASPEKFTMCFSLDSSCGPNSAATSYPADIDAHQESGRSISGETIMSVDIDERLACLSSM
VAVLCEQQLFLPLLRAFEMFLPSCSLLSFIRSLQAFSQMRLPEASAHLASFSVRIKDEAS
HTQLNSSKEVSVLAGWVAATAVKAADAVLSTCPSIYEKRCLLQLLSGVDFADSGSSSSYF
SRRYWKINLSEPDLHKDTDIYDWNDFMDDACLLTSLEKDGQWEQARTWARQLESSDIAWE
STLDHVTESQAEAMVAEWKEFLWDIPQERAALWGHCQSLFMRYSLPPLKAGLFFLKHAEA
VGKEIPARELHEILLLSLQWLSGTMTKSSPVYPLHLLRDIETRVWLLAVESESQSKADGE
FATPAVAHNIAVGNGTSIIEQTADVITKIDSNMGSPHMKATERNGIRDNLSCQHAQLFES
NSEASSTTINNTRGKRRVKTNLPLRRGVNDNFESRTSDLDNNSNNFQSSKIGEQARNILS
EEEFAKMEESLSGWEQNVRPVDMEKAVLSLLEFGQITAAKQLQQKLSPSYIPEELVLVDV
ALKIANNSSIGISLSCFDTEALSILQSLGVASSSDMIDPLQVMEKLAVKCGEGRGRALIR
RIIAVIRTAKLLGLPFSEAFEKQPIEILQLLSLKAQDSFDEAKFLVETHIMPASSIARIL
ADSFLKGLLAAHRGGYLDSQKEEGPAPLLWRSSDFLKWAKLCPSEPEIGHALMRLVMTGH
EVPHACEVELLILSHHFYMSSSCLDGVDVLVTFAANRVDSYVLEGDFPCLARLITGVSNF
HSLSFILSILVENGQLELLLQKYSATDTATGTPASVRGFRMAVITSLKQFNPNDDDALSM
VYRHFDMKHEAASLLELRAEQYMNSWLSRYDKERRNDELLEAMHHLVETAEVLSTIDAGQ
RTHRACARASLLSLQIRIPDLLWIGLSETNARRIFVEQSRFQEALIVAEAYNINQPMEWA
PVFWNQMLKPDLIEQFVAEFVSVLPLQPPMLLELARFYRAEVAARGEQSHFSVWLSPGGL
PAEWVKHLGRSFRSLLRRTRDMRLRLQLAALATGFVDVLDICNKVLDKVPENAGPLILRK
GHGGAYLPLM
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaccgacagtgaatcaccacaaagtttctttagttctttacccttagctgaa
gcatcatgcagctgtcagtgggagtgtctaaaagttttgtctagctcttcaggttatttg
atcggcttagttttgactcctaatgactcagtaacttgtgaggcccatccatgcaacacg
gagtgtattttgattgctgttcttgagctaaaccagtggggtatacagtggaactttgtg
gcagaccttcaggatgtacgtgatggtgttaaggccagtccaaaatgggttgattttcag
ttgtcagatatgtttcttgcctgccttaatgcaacaggttttgttgccatttggaatgtg
aaaactggtggccttgccacatcattcagtgttcttcaacagtgcagaacaggtctggag
atgcccacgaggagctctatgcctgatgtgacaaatttgcatgggggaaacatctctgtt
gagagctttgctggtagaatgtttaagcggttagttttggcatcgtattctcatcttctt
gctgtcgtagatgaggttggagtagtgtatgtgttctatgcagatgacaccttaaacttc
aaagctaatgtgcttgaaaactttgatctgagtgttacgaatcattttggtgattgtttg
tctgcctgggaagccgctggtcatgagatagggagtctatcatttagcactcatcagtcc
atacgacaggggtcacttaatccagccaaattggttcctgaggtctcatggaaaaatgat
gttggtattgtcaggcctagaaaaagaaggaagtgtagatgcgatgaaaatgaagtggac
agctggccaagtggttttgtcactacagggcagatgaaagttgggcctgcttatcctgac
actctgaattcctctagtaccttaaggaggatacttcttcctccatgcagatcatatgag
gatgtaattagtctgtctccgcttggactaacgaggatttttaaaggttcaaatgcagat
ggaaatgagcatgtcaaaatttttcataccgagttgcttatgtattcatcttttcttggc
gaaagagatattgatgttggatttatggacaaaaggcttccatttaagaaagattctgct
tttgtcggagattctgttgtttgctgctgtcagggatatctgtatctaatcactcagaat
ggcctttccgtggtccttccaccagtttctatttcatctttttcgtctcatggtgatgct
atcaaattttggcaaccgggttttgctgttggtagtgcatgcaatgctctgaacctatta
tcagttgaaagatctgaaacaaggtggaaaccctggcaaatagaagttttggatagagca
ttgttgtatgaagggcctgcactagcagataggctctgctgggagaatggatgggacttg
aaagtctctaggttacgttggctgcaattggccctgcattactcgatgattgctgatcta
gagcagtcacttgatatgctcgctgaggtcaatcttgcagaagaaggtgtcttgcaactg
ctattggcatctattcatcggttatctggtaggtctggaagcgataatgaagtcgcagtg
tcatcaaggttaatggttttagctgtccgctttgcaacaagaatgataaaatgttatgga
cttcagaagcagaacacagacatgccagataattcagtaaagcttcatgaaatgtcttcc
cttttgatggtaataaggagtatccaacaccgagtctctgcaaagaatcagaattctgtt
cggatgggagatgataagaactcactgaaaataggtacagaattattgcaaaatgattct
tcactttcagttgttgtagtggatggtctttcatcagggctgtcaggtggtttagatgct
catgacaggcaagagtcagctcatgtgttggttcctgatagcgacagcctgttagctcta
gcgccagctgaatcatctcttagtgcttcgaatttccatgatattaataccaataaaggg
actgctcaagatgggagacaaattattcaaggaaacatcaaggaaatgattaatagatgg
gaaatgaataactttgacttgaaaactgtagtcagagaagcactgcaatctggtcgccta
cctttggcagttcttcagctgcagcttttgcgccagagggaattagtttccaatgaggat
tcagaagatgctttctccgaagttcatgaaataggaagatctattgtatatgatctgttg
atgaagggtaaaactgaattggctgtagcaacgctagaaaggttaggagatgatgtagag
tcagacctaagacaacttatgcaaggtactgtcaggaggtcattaaggctgcaaattgct
gatgagatgaagaagcgtgggttcataaggtcaagtgaatggaagatgctagagactata
actctgattgagcggttctacccaagcagcagcttctgggacacatattttgtcagggag
aatgtcattcgtgatgctgcaaagattgttacactgccaggagaagataaacctgcatta
tctctccatatccgcaaccaaccccttattgaatgcggtgatgttgatggaacagtgctt
ggttcttgggtgaacattgatgattacactgattcaaaggagtcctctgggagcaacatt
tctgatggctactgggcctgcgctgccgtatggtcggatgcttgggatcagagaactgtg
gaccgcatattgctggatcagccttatcatgtacatgctcatatcccatgggaatctcag
tttgaatattttgttggtcataatgatgcggggaaagtctgtgaacttctggacatgatt
cccaacagcgtacttttagaagggattattagagtaaatgtggacagtttacaagctgcc
gacaacaccgtttctgacctaacagtccctgattacaacatgtacatatgtgactcagaa
gagctggaacctgtttgcatggagataccacatgttaaggtatttagatccttgtacaat
catgaatcaacgtcgtacatcagaatgctaatacagcaggagttggcaaagaaacacatc
tttgtgaaagagtactggaaaagtactactgaaattatacctttgcttgcccgtgctggc
atgcttataaaagttggtccgaggaaggaatattctacgacattttctgcgtcagagatg
ccagatgatgccaatttccagggtcgtgaaggcgcattgcataagttagtcatacgtttc
tgtgtgcaatataacttgccatacctactggagctctatctggacaactgtaacttggct
cctgaaaaggattgtatccctttactcaaagacgctgcaggtgattgcaagtgggcacaa
tggttactcttctccaggatcaaaggtcttgagtatgaggcatcattctctaatgcccgt
tggaatttgtcacagaaaatgattaatagtagtaatcttactgctattgagattgatgaa
atgttgtatacagttgatgatatggctgaacgaattggtgaaatgtctgcactggctacc
ttaatgtatgcttcagcaccaattcagaaatccatatgtacaggaagtgtgaacagaagt
cgtggtttgccatctcagtgcacattagagaacctgggtccttgtctccagcaatttccc
acgctatggaaaaccctttattctgcttgttttgggcaaggtgaatatgggtgtttaaac
tactctcctgccaatgtgtttggaaaatcatcaatttcagagtacttgcgatggcgctat
agcattttttcctctgctggaggagacacttcgttgttgcaaatggttccatgttgggtc
ccaaagtctattagacgattaattcaactctttgaacagggcccttttggaatgcaactg
ctatcaagtgctccaccatctgaagagttattcactcacagtgtcactgattatatatac
aattccactggatatactgacgccaacgcactgtccttagaagcatcgatccaaaaaagt
gttgaagaagaattatattcttcccttgaggagaaagatgtgagagtggaacatcatttg
caccgtggtcgagccctagctgctttcaggcatcttcttgttaagagagcttcgcagttg
aaatcagccagtgcatgtcaagtgatacctgcacagtctaatgttcaagcagatgtacaa
ttgatacttgctcctttaagtcaagctgaacgatcaattcttatatcggtggctccacta
gccattacaaactttgaggactcggctctagttgcttcctgtatattcttgttggaactt
tgtggcctgtgtgccaacatgcttcgtttagatattgctgcacttcgacgcatctcttcc
tactacaagtcagttcagcaaaaaaaacattttgatctatcttcacctaaggccccagag
ctccatatgcagtcccatggagctgacatagctcctgctctagctcgagcattagccgaa
gattatgtccagtctgatcatctgcatgtattggagcagacgcaaacctcgatggctccc
aagagggaacagacaccacagcctcttattgctattctgcagcaccttgaaaaagcaagt
ttgccatcattagacgaaggtaaaacctgtggattttggcttttgactggcattggtgat
gcatcagtttaccgatcccagcagaacgaagcaagtcaacattggaatttggttactgaa
ttctgtcaggcacaccatctcccactaagtacaaaataccttgctttactggccaatgac
aatgattgggttggttttttaacggaagctcagatagctggattcccaattgaagttgtt
attgaagtggcagccaaagagataagggattcaagactaaggactcacatattgactgtt
ttaaaaaatatgatgtcacttagaaggaaatcatccggtaatataccttcaggaagtagt
gattcatctttctctgctgttgatggcaataatcctgtggaacttttcggcattcttgga
gtctgcgaaaaacaaaagaaccctggggaggcactcctgaataaagcaaaacaaatgcag
tggtcgttgctagccatgattgcttcatgctttccagatgtaactcctctctcatgctta
agtgtttggcttgagattacagccgcaagggagatgtcctcgatcaaggtggatgatatt
tcctcgaaaatcgcaaagaatgttgaatctgctgttgtggccacaaacaaattgccaggc
acttgtaggaatgtggaatttcgttacaatagaaagaatccaaagcgaagacggtttctt
gaagcctcaccggaaaagttcacaatgtgtttctcgttggatagctcatgtgggccaaat
tctgctgcaacttcctatcctgcagatattgatgctcatcaagaaagtggaaggtcaatc
tctggagaaactataatgtctgttgatattgatgaaaggcttgcatgtttatccagcatg
gtagcagtgctttgtgaacaacaactgtttctaccattgcttagagcttttgaaatgttt
ctgccttcttgctcccttctttccttcatacgttctctgcaggcattttctcaaatgcgt
ctgcccgaggcttctgcacatttggcatcattttcagtgagaataaaagatgaagcttct
catactcaactaaactcctctaaggaagtgtctgttctagcaggatgggtagctgctaca
gctgttaaagctgcagatgctgtactctcaacttgtccatcaatttatgagaagaggtgt
ttactgcagcttctttctggtgtggattttgctgacagtggctcttcatcatcttacttt
agccgaagatattggaagattaacctgtccgaacctgatttgcataaagacactgatatc
tacgactggaatgatttcatggatgacgcttgtcttttaacatcattagaaaaggatggt
caatgggagcaagctcgcacatgggcaaggcaactggagtcgagtgacatagcttgggag
tctactcttgaccatgtcactgaatcacaggcagaagccatggttgctgaatggaaggag
tttctttgggatatcccacaagaacgtgcagccttgtggggtcactgccaatctctcttc
atgagatactctttacctcctttaaaggctggattatttttccttaagcatgctgaagca
gtaggtaaagagataccagcaagagagcttcatgaaatactactgctatctctacaatgg
ctaagtggaactatgactaaatcctctccagtctatcctcttcatcttctacgagatatt
gagaccagggtttggctcctggctgttgagtccgagagccagtccaaggctgatggtgaa
tttgccactcccgctgttgctcacaacatagctgttggaaacggtaccagtattatagaa
cagactgctgatgtcatcacaaaaatagacagcaatatgggttcgccacacatgaaagct
acagaaaggaatggcataagggacaatttatcatgccagcatgcgcaacttttcgagtct
aacagtgaagcatcttcaacaacaataaataacacaagaggaaagcgaagggtgaaaaca
aatttaccacttagacgaggtgtcaatgataattttgaaagtagaactagtgatctggat
aacaattctaacaattttcaaagttcaaagattggtgaacaagctagaaatatactttct
gaagaggaatttgcaaagatggaagaatctttatctggttgggaacaaaatgttaggcct
gtggatatggagaaggctgtgctttccttactggaatttgggcaaataactgctgctaag
caactccagcaaaagctgtctccatcatatattcccgaagaacttgtccttgttgatgtt
gctttaaaaattgccaataacagcagtatagggatcagtttgtcatgctttgacacggag
gctctttcaatacttcaatcactgggagtagcaagtagcagcgatatgattgacccgtta
caggttatggagaaactagctgtgaaatgtggcgagggccgtggacgagctcttattagg
agaataatagcagttattcgaactgctaaattattgggactcccattttccgaagcattt
gagaaacagccaattgaaattctacagttgctttccctgaaagctcaggattcttttgat
gaagctaaatttctggtggaaacacacatcatgcctgcatctagcattgcaagaattctc
gctgattcgtttctaaaggggcttttagctgcacatcgtggaggttatctggattcccaa
aaggaagaaggtcctgcaccactattgtggagatcaagtgacttcttaaagtgggcaaaa
ttatgtccatcagaaccagaaattggtcatgctttaatgcgtttggtaatgactggacat
gaagtaccgcatgcttgtgaggttgaactcctaatattgtcacaccacttctacatgtca
tcttcttgtcttgacggagtggatgttcttgtaacatttgcagcaaatagagtggactca
tatgttttagagggggattttccttgtttagctcgcttaatcactggagtgagcaatttc
cattccttgagcttcattctttccatccttgtagagaatggccaattggagttgctactt
caaaagtattctgccactgacacagctactgggacgcctgcatcggttcgaggatttagg
atggctgttattacatcactgaaacagtttaatccgaatgacgacgacgctctctcaatg
gtatacaggcacttcgacatgaagcatgaggctgcttctctccttgaattgcgtgcagag
caatacatgaacagctggttatcgcgatacgacaaggagcggagaaatgatgaactcctt
gaggctatgcatcacctcgtagagacagctgaggttctttcaacaattgatgccggccaa
agaacacatcgtgcttgtgcccgtgcttctcttctgtcacttcagattcggatacctgat
cttctgtggattggtctttctgaaaccaatgcccggcggatatttgtggaacaatctaga
ttccaggaagcccttattgttgctgaagcatacaacataaatcagcccatggaatgggct
ccagtcttttggaaccaaatgctgaaaccagatctaattgagcaattcgtggctgagttt
gtatcagtgctgcccctgcagccgccaatgcttctagagcttgcaaggttttacagggcg
gaggttgcagctaggggggagcaatcacacttctctgtctggctttcgcccggaggcttg
cctgcagagtgggtgaaacatcttggcagatcattcagaagcctgctgcgtagaacgagg
gacatgaggctgaggctgcagttagcagccctggcgacaggcttcgttgatgtccttgat
atatgcaataaagttttggacaaagtcccagagaatgctggcccgctgatcctaaggaag
ggccatgggggtgcataccttcctcttatgtaa
DBGET
integrated database retrieval system
