Shewanella japonica: SJ2017_1000
Help
Entry
SJ2017_1000 CDS
T04959
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sja
Shewanella japonica
Pathway
sja00550
Peptidoglycan biosynthesis
sja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SJ2017_1000
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sja01002
]
SJ2017_1000
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
SJ2017_1000
Enzymes [BR:
sja01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SJ2017_1000
Peptidases and inhibitors [BR:
sja01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SJ2017_1000
Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SJ2017_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
ARD21331
LinkDB
All DBs
Position
complement(1207778..1208956)
Genome browser
AA seq
392 aa
AA seq
DB search
MMKIVNTPLKSLLLLSAVSFSSQAANAPMVMPNAPTVAAKAYVLMDYNSGRIIAENNAYE
SLNPASLTKMMTSYVIGHEVKVGNISLDDEVTISKKAWSKNFPDSSKMFIEVGKKVTVED
LNRGIIIQSGNDACVAMAEHIAGTEDGFVDLMNSWSKQLGMTQSYFENSHGLDSDNHKTT
AYDMALLGAALIRDVPDEYRVYSEKSFTFNGIKQYNRNGLLWDNSLNVDGIKTGHTSGAG
YNLVSSATNDGMRLITVVMGTGSESARKAESKKLLNYGFRFFETITPYKAGDTFVTQKIW
YGDRETVDLGVVTDTPITINRGQAKNLQANFELTKPLSAPLAKGETVGRIFFQLNGKDIA
EFPLVTLNEVNEGSWFSKLMDYFKQMFEGWFG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaattgtaaacacaccgcttaaatctttgctgctgctttccgctgtatctttt
tcttctcaagcagccaacgcacctatggttatgccaaatgcgccaacggtagccgctaaa
gcttacgtattaatggattacaactctggccgcattattgctgaaaataatgcctatgag
tcacttaaccctgctagcttaaccaaaatgatgaccagctacgttattggtcatgaagtt
aaagttggcaacatttcgctggatgacgaagtaaccatcagtaaaaaagcatggtctaaa
aacttcccagattcgtcgaaaatgtttatcgaagtaggtaaaaaagtcactgttgaagac
ctaaaccgaggcattattattcaatcgggtaacgatgcttgtgtcgccatggctgagcat
attgccggaacagaagacggctttgtcgatttaatgaactcttggtcaaaacagctaggt
atgacccaaagttactttgaaaactcacacggtcttgattctgacaaccacaaaacaact
gcatacgacatggcattattaggtgctgcattaattcgtgatgtaccagatgaataccgt
gtttactctgaaaagtcatttacctttaacggtattaaacagtacaaccgtaatggcttg
ctatgggacaacagcttaaatgttgatggtattaaaacaggccacacttctggcgctgga
tataacctagtctcttctgcaaccaatgacggcatgcgtttaatcactgttgtgatgggt
acgggcagtgagtcagctcgtaaagcggaaagcaaaaagttacttaattatggtttccgt
ttctttgaaacgattaccccttataaagcgggtgacacctttgtaactcaaaaaatctgg
tatggcgatcgtgaaacggtagatttaggtgtggtcactgacaccccaattaccattaat
cgtggccaagctaaaaacttacaagctaacttcgagttaactaagcctttatctgcgcct
ttagctaaaggtgagacggttggccgtatcttcttccaacttaacggaaaagatattgct
gagttcccacttgttactcttaatgaagtgaacgaaggcagctggtttagtaaacttatg
gattacttcaagcaaatgtttgaaggttggtttggctaa
DBGET
integrated database retrieval system
