Shewanella japonica: SJ2017_2640
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Entry
SJ2017_2640 CDS
T04959
Name
(GenBank) RNA polymerase sigma factor SigZ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sja03021
]
SJ2017_2640
Transcription machinery [BR:
sja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJ2017_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ARD22928
LinkDB
All DBs
Position
complement(3143671..3144219)
Genome browser
AA seq
182 aa
AA seq
DB search
MISEWQNHKTQLRGYVSQRIDDDSAVDDILQEVYIKASGNLHQLKSRGSLKSWLYRIAHN
TIMDFYRERQQFESLPDDLMAEELDTGKEAREELAQCLGPLIDELPEKYAKPLRLAELEG
VSQQRIAEQLGLSLSGAKSRIQRGRVKFRQQMMACCDFEVGQGGITGYTPKDANHRKKCK
SP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgaatggcaaaaccataaaacacagctacgaggttatgtaagtcaacgcatt
gatgacgacagtgcggttgatgatattttgcaagaggtttacatcaaagccagtggtaat
ttacatcagttaaaatccagaggcagcctcaaaagctggttgtatcgtattgcacataat
acgattatggacttttatcgagagcggcaacaatttgaatctttgccagatgatttaatg
gctgaagagctcgatacaggtaaagaagcaagagaggagctcgcccaatgtttagggcct
ttaattgacgagttgccagaaaaatatgctaagccattgcgcctcgctgagcttgagggg
gtttctcaacaaaggattgcagaacaacttggtttatctttatctggagcgaagagtcga
atccaaagaggccgagttaaatttaggcaacaaatgatggcatgttgtgacttcgaagtc
ggccaaggcgggattacgggctacacccccaaagacgcaaaccacagaaaaaaatgtaaa
tcaccataa
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