Sphingobium indicum UT26S: SJA_C1-22130
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Entry
SJA_C1-22130 CDS
T01201
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjp01002
]
SJA_C1-22130
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sjp01011
]
SJA_C1-22130
Peptidases and inhibitors [BR:
sjp01002
]
Cysteine peptidases
Family C82
SJA_C1-22130
Peptidoglycan biosynthesis and degradation proteins [BR:
sjp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SJA_C1-22130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BAI97047
NITE:
SJA_C1-22130
UniProt:
D4Z365
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All DBs
Position
1:complement(2220678..2222189)
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AA seq
503 aa
AA seq
DB search
MLHGILLPALALAAWPAQAAAQPAPAADVQRTSVAAEIRSSAGGKLRDFYAPRGYWPLWI
ERGRVGPQADALIALIEGADADGLKPKDYGARELKALAKDADASGDPRLLARADIALSRA
FAALAGDMRKPSRKVKVRYLDPEVEPKDEEPKEILRAAAVAPSFVDYVRSIGWMSPIYVK
LREARADFAQRWGGLPQVPVPADVKLRPGMKAGAAALRRRLGLASGTAYDKALVARVKAF
QGDHGLKPDGVAGAATIAALNRGDDHYDRLIALNMERARLLPGPQVRHVVVDAASARLWY
FSKGAQDGTMKVVVGAKESQTPMMAGMVRYATLNPYWNVPSDLVERKLAPRMLNGASLTK
LRYEALSDWSANARKLDPAAVDWRAVADGRTELRVRQLPGGDNAMGKVKFMFPNDLGIYL
HDTPSRDLLAKPARQFSNGCVRLEDAQRLGRWFFGKPLKPASDKPEQHVPLPQPVPVYLT
YLTAVPLEDGVRFLPDVYGRDGV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgctccatggcatcctgcttccggcgcttgcgctggcggcatggcctgcccaggccgcg
gcgcaaccggcccctgccgcggacgtccagcgcaccagcgtggcggcggaaatccgttcg
tccgcgggcggcaagctgagggatttctacgcccctcgcggctattggccgctctggatc
gaacggggccgggtcggtccgcaggccgacgccctgatcgcgctgatcgagggagccgat
gcggacggcttgaagccgaaggactatggcgcccgcgaactcaaggccctggcgaaggac
gccgatgccagcggcgatccccggctgctggcgcgggctgacatcgccctgtccagggcc
ttcgccgcgctggcaggcgacatgcgcaagccatcgcgcaaggtgaaggtgcgctatctc
gatccggaggtggagccgaaggacgaggaaccgaaggaaattctgcgcgccgccgcggtg
gcgccgtcctttgtcgattatgtgcggtcgatcggctggatgagccccatctacgtgaag
ctgcgcgaggcgcgggcggacttcgcccagcgctggggcggcctgccgcaagtgccggtg
ccggccgatgtcaagttgcgccccggcatgaaggcgggcgccgcagcgcttcgccgccgc
ctggggctggcgagcgggaccgcctatgacaaggcgctggtcgccagggtgaaggcgttt
cagggcgaccacggcctcaagcccgatggcgtcgcgggcgcggcgaccatcgccgccctc
aaccggggcgacgaccattatgaccggctgatcgcgctcaacatggaacgcgcgcggctg
ttgcccggcccgcaggtgcggcatgtggtggtggatgcggcctccgcccgcctctggtat
ttcagcaagggcgcgcaggacggcacgatgaaggtcgtggtcggcgcgaaggaaagccag
acgccgatgatggcgggcatggtgcgatatgcgacgctcaatccctattggaacgtgccg
tccgatctggtcgagcggaagctggcgccccggatgctgaacggcgcttcgctgacgaag
ctgcgctacgaggcgctgtccgactggagcgccaatgcgcggaagctcgatccggcggcg
gtcgactggcgggcggtggcggacgggcgcacggaattgcgcgtgcggcagcttcccggc
ggcgacaacgccatggggaaggtcaagttcatgttccccaacgaccttggcatctacctg
cacgacacgccatcccgcgacctgctggcgaagcctgcgcggcagttcagcaatggctgc
gtgcggctggaggatgcgcagcggctgggacgctggttcttcggcaagccgttgaagccc
gccagcgacaagccggaacagcatgtgccgctgccccagcccgtgccggtctatctgacc
tatttgacggcggtgcctttggaggatggagtgcggtttttgccggatgtctatgggcgg
gatggggtttag
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