Sanguibacter keddieii: Sked_18040
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Entry
Sked_18040 CDS
T01214
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ske
Sanguibacter keddieii
Pathway
ske03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ske00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sked_18040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ske03021
]
Sked_18040
03400 DNA repair and recombination proteins [BR:
ske03400
]
Sked_18040
Enzymes [BR:
ske01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sked_18040
Transcription machinery [BR:
ske03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sked_18040
DNA repair and recombination proteins [BR:
ske03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sked_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ACZ21731
UniProt:
D1BH11
LinkDB
All DBs
Position
2011904..2012188
Genome browser
AA seq
94 aa
AA seq
DB search
MSGTVAAPVGITDPPIDDLLDRADSKYALVIYSAKRARQINAYYSQLHEGLLEFVGPLVE
TRNQEKPLSIAMREINAGLLTINPIEQPAEGTDA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgtctggaaccgttgccgcccctgtgggcatcaccgacccgcccatcgacgacctgctc
gaccgcgctgactccaagtacgccctggtgatctactcggccaagcgcgcccgtcagatc
aacgcgtactactcgcagctccacgagggcctgctcgagttcgtgggcccgctcgtcgag
acccgcaaccaggagaagccgctctccatcgccatgcgcgagatcaacgccggcctgctg
acgatcaacccgatcgagcagcccgcggagggcacggacgcctga
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