Saccoglossus kowalevskii (acorn worm): 100329034
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Entry
100329034 CDS
T04123
Name
(RefSeq) integrin alpha
KO
K06485
integrin alpha 6
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04512
ECM-receptor interaction
sko04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100329034
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100329034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sko04147
]
100329034
04515 Cell adhesion molecules [BR:
sko04515
]
100329034
04090 CD molecules [BR:
sko04090
]
100329034
Exosome [BR:
sko04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100329034
Exosomal proteins of breast milk
100329034
Cell adhesion molecules [BR:
sko04515
]
Integrins
Integrin alpha subunits
100329034
CD molecules [BR:
sko04090
]
Proteins
100329034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
LYRIC
FG-GAP_2
Integrin_alpha
LST1
Motif
Other DBs
NCBI-GeneID:
100329034
NCBI-ProteinID:
XP_006815839
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MARTTTIFNWINVVCLIVSCFLCMIDCFNLETRLPIVKEYIGTRNDSYFGFSVAQHQRTQ
QDGSVENLLLVGAPKLQTNQPGILQGGGVFKCPLNSYTDDCELLEIDTEGNDIGEEKSDQ
WLGVTVRSQGKDGKVVACAHRYKQVGDDYIYGVGKCYQLNSALELDIDHINGGTWTVCEG
RTPGHENYGFCQAGTDCDFTTNRKDIIIGTPGSMDWRGVIFTNDASDDEFPDPVVYKSGR
TEEEARVQKHSYLGFSVDSGNFITSGETWYVAGAPRHNSSGAVVLFAKGDDVLVAKDAIY
AERLASSFGYDVKALDINNDGFDDLVVGAPLYYDKEEGIGGLVYVYMNDQTGNFDEGNPT
RLSGPLDSMFGMSLTSLGDINLDGFNDIAVGAPYEDNGKGAVYIFHGGPDGIHHSYSQKI
MAADLPDSISSLRTFGYSLSGGLDLDDNGYPDLVIGSYESGAVVMLRSRTVLNLGSTLEA
NPTMLDVKNKTCQYEKKEYLCFTVKVCLNYTSDSGFNDAIDVEYYIEAEQARRDIGLQSR
VFFKDSSSHEYQDSMRLRRRGQQKCDQLTLYVTNDIRDILRPIDLELSYNIVEEDPALPP
PGPGLPSLSGQPVMNMNMPITNSIKVDFVKECGRDNICDSELGVSASFDLPGDPPTWSLG
EGDKGLFVKVTITNSGEAAYEAKMTVIIPDSLDYVNVVPINVPDDLSEFGCDDDPENATV
IICELGNPYPENREIMFNLKFGHERLLGSVGSISMNMFVETTSRDDNPYNDEAYISANIE
VVTDLLLQGQSNPELVSYSGEVRGESAMEYEYQIGNPVNHIYVLKNKGPGTVEVAHITIS
WPYEVASGKWLLYMTDYPELDGEGNCTIDPMYVNFLDVKKNKDESIVYSPDELPASTRRK
RDVAPSHDIIGPTGEKTGRIETLSCQHGTARCFTFDCFTGPLASGDSTVVRIRSRLWNST
FLEDFRKVTSVNIVSTGEVKILNGQYIGELDPSDNSLEIITEAHPDLAIIEEKKAVPIWI
IILAALGGLLLLIIVVIILWRCGFFKRKRVNQNTTSFRSTPSRHSRNGSTTEKSYKYEAT
YQDDRYN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggactacaactattttcaactggattaacgtagtttgtctcatagtctcatgc
tttctatgtatgattgactgtttcaacttagaaaccaggcttccaatagtaaaggaatat
atcggaacacgcaacgatagttactttggattttcagtagcacagcatcaacggacccaa
caagacggcagcgtcgaaaacctattattagttggcgctcctaaattacagacaaaccag
cctgggattctgcaaggcggcggtgtttttaaatgtccactaaactcttatactgatgat
tgtgagttgttagagatagatacagaaggtaatgacattggagaagaaaagagtgatcag
tggctaggagtgacagttagaagtcagggaaaagatggtaaagttgtggcatgtgcacat
cgatataaacaagtaggggatgattacatatatggtgttggtaaatgctaccaattgaat
tcagccttagagctagatatagaccatataaatggaggaacatggacagtgtgtgaaggt
agaacaccaggacatgaaaattatggcttctgtcaagctggtacagactgtgactttaca
actaatcgcaaagatatcataattggaacgcctggttctatggactggagaggtgtcatt
ttcaccaatgatgcatccgatgatgagtttcccgacccagtcgtgtataaaagcggtcgg
actgaagaggaggctagagttcagaaacatagttacctgggtttctctgttgattccggt
aatttcattacaagtggcgaaacatggtatgttgcgggtgcacccagacacaactcaagt
ggagcagttgtcttattcgcaaaaggtgatgatgtcctcgttgccaaagatgccatatat
gctgagagactggcctcttcattcggttatgatgtcaaagctctggatatcaataatgat
ggatttgatgatttagttgttggtgcccctttgtattatgacaaagaggaagggattggt
ggtctagtgtatgtttacatgaatgaccaaacgggcaattttgatgaggggaaccccaca
cgattgtctggtccattagattcaatgtttgggatgtcattaacttcccttggtgatatc
aacttagatggattcaatgatatcgcagtaggtgctccgtatgaagacaatggcaaaggt
gctgtatatatctttcatggaggaccggatggtatacaccactcttattcacagaagata
atggctgctgatcttccagattccatttcatctctccgtacatttggttactctttatca
ggtggcttggatcttgatgacaatggatatcctgacttagtgattgggtcttacgagtct
ggtgctgtggtgatgttgagaagtaggactgttctaaatttaggttcaacacttgaagca
aaccctacaatgttagatgttaaaaataaaacatgccagtatgaaaaaaaagaatatcta
tgtttcacagttaaagtttgtttaaattatacttctgactccggttttaatgatgcgata
gatgttgaatactacatagaagctgaacaggcaaggagagatataggtctgcagtcgcgt
gtattttttaaagactccagctctcatgaatatcaagacagtatgaggcttcgtagaaga
ggccaacagaaatgtgaccaactgacattatatgtcacgaatgatatacgtgatatctta
cggccaattgacctagaattgtcgtataacatagtagaagaggatcctgcattacctcca
cctggacctggtcttccatcattatctggtcagcctgttatgaatatgaacatgccaatc
accaattctattaaggttgactttgtaaaggaatgtggaagggacaatatttgtgattct
gaattaggtgtatctgcttcctttgatctaccaggtgatcctccaacatggagtcttggg
gaaggagataaaggtttgtttgtgaaagtgacaatcacaaacagtggggaagctgcatac
gaggccaaaatgacagttattattccagacagtttagattatgtcaatgttgtgccaata
aatgttccagatgatctttcagaatttggctgtgatgatgacccagaaaatgcaactgtc
ataatttgtgaattaggaaatccgtatcctgaaaaccgagagattatgttcaatttaaag
tttggtcatgaaagattattgggatcagttggcagcatatcaatgaatatgtttgttgaa
acaacaagtagggatgataatccatacaacgatgaagcttatataagtgcaaatattgag
gttgtcacagatttgttattacaagggcagtcaaatccagagttggtgtcgtatagcggt
gaagtacgtggagagagcgctatggaatatgaataccagattggtaacccagtcaaccat
atttatgttctcaaaaacaagggacccggcacagtagaagtagcacacataactatatct
tggccatatgaagtggcgagcggaaagtggctactgtacatgactgactatccagagctt
gatggcgaaggaaactgtactattgatcccatgtatgttaatttcttggatgtgaagaaa
aataaagatgaaagtatagtatactcgccagacgagttacctgctagtactaggcgaaaa
cgtgatgtggctccaagccatgatattatcggtccaactggtgaaaagactggcagaata
gaaactttatcatgccaacacgggactgctaggtgcttcacatttgattgttttacggga
ccattggcaagcggtgattccactgtggttagaattagatcgagactctggaatagtact
tttcttgaggattttcgtaaagtaacatcggttaatattgtttcaactggagaagtaaaa
attttaaatggtcagtatataggagagctggatccaagtgacaatagtttggagataatc
acagaagctcacccagacttagctatcattgaggagaaaaaagctgtgccaatctggata
ataatattagcagcactaggtggtcttctccttctcattatagtagttataatcctttgg
aggtgtgggttcttcaaaaggaagcgagtcaaccagaacacaaccagcttcagaagtaca
ccatcaagacattcccgcaatggaagtactacagagaagtcttataaatatgaagcaact
taccaagatgatagatacaattag
DBGET
integrated database retrieval system