Saccoglossus kowalevskii (acorn worm): 100377951
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Entry
100377951 CDS
T04123
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100377951
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100377951
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100377951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
zf-C3HC4_2
PDZ_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-TRAF
zf-RING_6
zf-rbx1
DUF6288
Prok-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
100377951
NCBI-ProteinID:
XP_006825507
LinkDB
All DBs
Position
Un
AA seq
1062 aa
AA seq
DB search
MGYDIERFCETIEENLKCSVCLGVLEDPLATPCGHVFCSSCVLPWVVQNGNCPLKCENFS
PKELNSVLPLRNIIQKLEVRCEYHRRGCNEMVKIHNLSQHVEDCDYLPIQCSNKGCRVVL
NIKDQLQHETQTCEYRPVGQCKNGCGLTLLCRDVHGHECLKALQAHVASQQVKLVSLEHD
LKKMAIRYSKREKSLVVQLATLQNEIHMQALRYQKKLNEYKSQIQYLSKRATSAEKQPCE
EATMSISLERENGSLGFNIMGGNRIDGALPAEGIVVSRVTDHGPADRGKLKVNDRIIQVN
GKDLSRASHEEAVEAFRNASEPIIVQVLRRTSRTKLKSRESTTCSVSTQTDIQMDNFYTN
SIHRCPTPPPMSMSIKGLCEISPQQPMTLIDNDLLNELDSVDNYDFPLLDEGLDKGYEME
YEEVFLRRRNNNDKLGLTLCYGTDDEEETGIFVSEIEPYSIAGQDGRIREGDQILQINGV
DVHNKDQAIMLFSQDRQEIAILVCRPQLQECSHNDEGGTTDTGTTENTSTHHEKDSGVGR
TDESTRNDESSEQEILGDDCQKNPGGDSGSLGSGGELRHSNDSFTSTDLPDQDFTGHEIS
VEECMKFKEALASKCDRSQCKSVPECNGRTNDTIGATDSSSRDYIHHLHNSDLPLYADDN
LGYNNVVYEGDISRQTDDDVWVAQDFARSHEIILTTIPEDQLSLKRMSSDSEKEKQGKLG
REPSQESIQTEELGQARAALTLHLRSSTEFEQTRNKDRNRDSSSEKESSGSGKQINKCGT
PTKHDGKSQRAGSPSKSKPKEKSGAKERMSSPSKDKRDSNQNQISSSHHQKNSNRKQVSN
DNGGINQQNSCLREQNRKLHEQNMHLRRSMHRLSEVGMSVPSYAQHYQSYLHLIQQREDM
SLSSAVKKEKPDTEWKVKVRSDGTRYITRRPVRDRLLKQRANRIREERSGMTTDDDAVSE
VKTGRYWSKEDKKRHLERARDQKQRKEFMIRARMESLKEQNEDGDAIKKESIVELSHKKM
LKKKGRKIFDDFVTVQEMLAHGSKLSPETLKQFNPLLNVTTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgacatagagcgtttctgtgaaacgatcgaagaaaatttgaaatgcagtgta
tgtttgggtgtattggaggatccgctagctacgccatgtggtcatgtattttgctcatcg
tgtgttctaccatgggttgtgcagaacgggaactgccccttgaaatgcgagaatttctca
cccaaggaactgaacagcgttctgccgcttaggaatataattcagaaactcgaagtacgt
tgtgaatatcaccgacgtggatgcaacgaaatggtgaaaatacacaatttatcgcagcat
gtagaagactgtgattacctgccaatacagtgctccaataagggctgtcgagtagtgctg
aatatcaaagaccagctacagcacgagacacaaacatgtgaatatagacctgtgggtcag
tgtaagaacggctgtggattaacgctgttgtgccgtgacgtacacggacacgaatgtctg
aaggcacttcaggcacatgtcgcctcgcaacaggtcaaactggtcagtttggagcacgat
cttaagaaaatggccattcgttatagcaaacgcgagaagtcgcttgtggtccaattggct
actttgcaaaacgaaattcacatgcaagcgctacgctaccaaaagaaattgaatgaatac
aaatcgcagatccagtatttgagtaaacgggctaccagcgcggaaaagcagccttgtgaa
gaagcgacaatgtcgatctccctcgaacgagaaaatggtagcctgggtttcaatataatg
ggcggaaatcggattgatggtgctttgcctgctgaaggaattgttgtttccagagttacg
gatcacggtccagcagacaggggcaagctcaaagtgaacgaccgcattatacaggtcaac
ggcaaggatctgtcaagagcgtctcacgaagaagcagttgaagcgttcaggaatgcttct
gaaccaattattgtgcaagttttaagaagaacgtctcggacgaaattaaaaagtagagaa
tcaacaacatgcagtgtatcaacgcaaacagatattcaaatggataatttttatacaaac
tccattcatagatgtcctacaccaccgccaatgtcaatgtcaattaaaggactatgtgaa
atatctccacaacagccgatgacattaattgacaatgatttactaaatgaacttgacagt
gtagataattatgattttcccctgctggatgaagggcttgataaaggctatgaaatggaa
tacgaggaggtgtttttgaggagaagaaataacaatgacaaactgggactgacgctgtgt
tatggcactgatgatgaagaagaaacgggaatatttgttagcgagatcgaaccttatagt
atagcgggacaagatggccgaatacgggaaggagatcagattctgcagatcaatggagtg
gacgtacacaataaagaccaggccatcatgctgttttcccaagaccgacaagaaattgcg
attcttgtctgtagacctcagttacaggagtgtagccataatgacgaaggtggcaccacc
gacacagggactacagaaaatacgtccactcaccacgagaaagacagtggtgttggaaga
acagatgaaagcactcgcaacgatgaaagctcagaacaagaaattcttggcgatgattgt
cagaagaatccaggaggcgattctggcagcctcggcagtggtggtgaattgagacatagt
aacgacagcttcacttcaacagatctacctgaccaagatttcacgggacatgaaatttct
gtggaagaatgcatgaaatttaaagaagccctagccagtaagtgtgacagatcacaatgt
aaatcagtgcccgagtgtaacggtcgtacaaatgatacaatcggtgctactgattcctcg
tcacgggactacatacatcatttacacaactctgacctgccattatacgctgatgacaac
ctcggatacaacaatgttgtctatgaaggagacatcagcagacaaactgacgatgatgtg
tgggttgctcaagatttcgcaaggtcacacgaaatcatactaactactatacctgaagat
caattaagtctcaaaagaatgtcgtcggacagtgagaaagagaaacaaggaaagttggga
agggagccgagccaggaaagcattcaaacagaggaactcggacaagcacgagctgctttg
accttgcacttgagatcaagcacagaatttgaacaaactagaaacaaggatagaaaccga
gatagcagttctgaaaaagaaagttctggttctggaaaacaaataaataaatgtggcaca
ccaacaaagcatgatgggaaatctcaaagggctggaagtccctctaagtctaaaccaaaa
gaaaaatctggtgccaaagaaagaatgagtagcccaagtaaagataaacgagactccaat
caaaatcagatttcatcaagccatcatcagaagaacagcaatagaaaacaggtttccaat
gacaatggaggcattaatcaacaaaattcgtgtttgcgagaacagaacagaaagctacat
gaacagaatatgcatctaagacgcagtatgcatcgcctttctgaggttggaatgtccgtg
cctagttacgcgcagcattatcagagttatctccatttaattcagcaacgtgaagacatg
tcgttgagttcggctgttaagaaagaaaagccagatacagaatggaaagtaaaagtcaga
agtgatggcacgcgatacataacgcgtagaccagtcagagatcgtctactgaaacagaga
gctaataggattcgagaggaaaggagcggaatgacgacagatgatgatgctgttagcgaa
gtcaaaactggtcgctattggagcaaagaagacaaaaagaggcacttagagagggccagg
gaccaaaaacagcgcaaagagtttatgattagggcacgaatggaatctttgaaagaacag
aatgaggatggcgatgcaattaagaaagaaagcattgtagaattgagtcataagaaaatg
ttgaaaaagaaaggacgaaaaatatttgacgactttgtgacagtgcaggaaatgcttgcg
catggtagtaaactaagtcctgaaacgctgaaacagttcaatccactactaaatgtaacc
actgtgtaa
DBGET
integrated database retrieval system
