Sphingomonas koreensis: BRX40_16295
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Entry
BRX40_16295 CDS
T04828
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skr03400
]
BRX40_16295
Enzymes [BR:
skr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRX40_16295
DNA repair and recombination proteins [BR:
skr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BRX40_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
APR53769
UniProt:
A0A1L6JCT8
LinkDB
All DBs
Position
complement(3365566..3368964)
Genome browser
AA seq
1132 aa
AA seq
DB search
MAVSGASTGALPPLAGNQAAASSPGASVWLSASAGTGKTQVLAARVFRLLLRGVDPGAIL
CLTFTKAGAAEMAARVSGRLAHWVRAPRMEVFKDLEALGEDADDARIAFARTLFAKVLDA
PGGGLRIQTIHSFCQTLLSAFPVEAGLTPGFRPLEAREETALARDTLAAMLADAGREGRE
TLIDAVGALSLRLGEGKAEAFLHACAKAPDAMAALPSGVQPWLRRAMGLPQGDVLWEAAR
WCADDAFDVEGLRRIADANHAWGAATGQENAAVAGAWLAADPAVRVAMLGDLRKIVLTAK
DEPKKVSPKLAALDPDYETLAGELGEACIAVSGMIARAGYADLLAQGLTAGREYAAAYQT
AKRRMGAVDFDDLIGKTVALLDQPGMGDWIRFKLDQATSHVLIDEAQDTNIAQWRIVRAL
ADEFFAGEGAHGEEVRTLFTVGDYKQAIFGFQGTDPVNFAAAHMHFSERSDGALETLSLT
HSFRSTAPILEFVDAAVAALPEPGMGTESEAHASRVAGPGTVTLWPPVVAGGDPEDEEGW
IDDATREVANRIARQIRDWIGTLELESKGRTLRPEDVMILVKRRGELASLLVARLHAEGV
PVAGVDRLRLNAPLAVQDLLAAVRFALQPDDDLSLAALLVSPLIGWSQDELMRAALRERG
SLWRHLRATQADDRLAPLYGLLARADLMTPHRFLETILSGEMDGRRKLLRRLGKEALDPV
EELLTAALGFEGLATPTLQRFLDWFDRGDVEIVRDAAQPQDAVRVMTAHGAKGLQAPLVI
LADATADPQGGNRGDFVKWAPEDHDGAPFPVFRPGKAERGGPVDAAVALVDARELEEHWR
LFYVAATRAEERLVIAGALGPKAKGEAPGASWYAASRAAFDALGVAESEAERSFTGHRPQ
PPVARKPREALVADARVELPGWVTRPAPAEARPPRPLAPSSLGEDLVADPPPAPALRAAA
ERGRLIHALLERLPAVAAERRADVAARWLEGAGGVADPAMRSELAAAALGVIADPDFAEL
FGPEALAEAPIAAVVAGGHVVSGTADRLLVTDDGVLVVDFKTGRRAPATLDDVPPYHLRQ
MAAYVAALEVVFPGRQVVAGLLYTAGPVLYALPDALLATHKPGFAAAEQSLI
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagcggcgctagcaccggcgcgctgccgcctctggcgggcaatcaggcggcg
gcgtccagcccgggcgcgagcgtatggctgtctgcctccgcggggacgggcaagacgcag
gtgctggccgcgcgcgtgttccgcctgctgctgcgtggcgtcgaccccggcgcgatcctg
tgcctgaccttcaccaaggcgggcgcggccgagatggcggcgcgggtgagcgggcggttg
gcgcattgggtgcgcgcgccgcgcatggaggtattcaaggatctggaggcgctgggcgag
gacgccgacgatgccaggatcgcttttgcccgcacgctgttcgccaaggtgctggacgcg
ccgggtggtggcctgcgcatccagacgattcacagcttctgtcagaccctgctctccgcc
tttccggtcgaggcggggctgacgccgggctttcgcccgctggaagcgcgcgaagagacg
gcgctggcccgcgacacgttggcggcgatgctggccgatgccgggcgcgaagggcgggaa
acgctgatcgacgcggtcggcgcgctcagccttaggctgggcgagggcaaggccgaggcg
ttcctccatgcctgcgccaaggcgcccgatgcgatggcggcgctgccgtcgggcgtgcag
ccgtggctgcggcgggcaatgggactgccgcagggcgatgtgctgtgggaagcggcgcgg
tggtgcgcggacgacgcgttcgatgtcgagggactgcggcggatcgccgacgccaatcac
gcttggggcgccgcgacggggcaggagaatgcggcggtggcgggcgcgtggctggcggcg
gaccctgcggtgcgggtggcgatgcttggcgacctgcgcaagatcgtgctgacggccaag
gacgagcccaagaaggtatcgcccaagcttgccgcgctcgacccggattacgagacgctg
gcgggcgaattgggcgaggcatgcatcgcggtttcggggatgatcgcgcgtgcgggctat
gccgatctgctggcgcagggactgaccgccgggcgcgaatatgcggcggcgtaccagacc
gccaagcgccgcatgggggcggtcgatttcgacgatctgatcgggaagacggtggcgctg
ctcgaccagccgggcatgggcgactggatccgcttcaagctcgatcaggcgaccagccat
gtgctgatcgacgaggcgcaggacaccaatatcgcgcaatggcgcatcgtccgtgcgctg
gccgacgagttcttcgcgggcgagggcgcgcatggcgaagaggtgcgcacgctgttcacg
gtgggcgactataagcaggcgatcttcggcttccagggcaccgatccggtcaatttcgcg
gcggcgcacatgcatttcagcgagcgatcggacggcgcgctggagacgctgtctttgacg
cactcgttccgctcgaccgcgccgatcctcgaattcgtcgacgcggcggtggcggcgctg
cccgagccgggaatggggaccgagtccgaagcacatgccagccgcgtcgccgggccgggg
acggtgacgctttggccgccggtggtggcgggcggcgatcccgaggacgaggaaggctgg
atcgacgacgcgacgcgcgaggtggccaaccgcatcgcgcgccagatcagggactggatc
ggtacgctcgaactggagagcaagggacggacgctgcggcccgaggatgtgatgatcctg
gtcaagcggcgcggcgagctcgcttcgctgctggtcgcgcggctgcatgccgagggggtg
ccggtcgcgggtgtcgatcgcctgcggctcaacgccccgctggcggtgcaggacctgctc
gccgccgtccgtttcgcgctccagcctgacgacgatctgtcgctcgccgcgctgttggtc
tcgccgctgatcgggtggagccaggacgagctgatgcgcgcggcgttgcgtgagcggggc
agcctgtggcggcatctgcgtgcaacccaggccgacgacaggctcgcgccgctctacggt
ctgctcgcgcgcgccgacctgatgacgccgcaccgtttcctcgagacgatcctgtcgggg
gagatggacgggcggcgcaaactgctgcgccgattgggcaaggaagcgctcgacccggtc
gaggagctgttgactgcggcactcgggttcgaaggcttggcgacgccaaccctgcaacgc
ttcctcgactggttcgatcgcggcgatgtcgaaatcgtccgcgatgccgcgcaaccgcag
gatgctgtgcgggtgatgaccgcgcacggtgcgaaagggcttcaggcgcctttggtgatc
ctggccgatgccaccgccgatccgcaggggggcaatcgcggcgacttcgtcaaatgggcg
cccgaggatcatgatggtgcgccgttcccggtgtttcgtcccggcaaggccgagcggggc
gggccggtggacgccgccgtggcgctggtcgacgcacgcgagctggaggagcattggcgc
ctcttctacgtcgccgcgacacgggccgaggagcgactggtgatcgcgggcgcgctgggg
ccgaaggccaagggtgaggccccgggggcaagctggtatgcggcgtcgcgcgccgcgttc
gacgcgctgggcgtcgcggagagcgaagccgagcgcagcttcaccggccaccgcccgcag
ccgccggtggcccgcaagccgcgcgaggcgctggttgccgacgcccgggtggagctgccc
ggatgggtgacgcggcccgcgccggccgaggcgcgtccgccacggccgctcgcgccttcc
tcgctgggtgaggatctggtggccgatccgccgcctgcgcccgcgctgcgtgcggcggcg
gagcgggggcggctgatccacgccctgcttgaacgcttgcccgccgttgcggcggagcgg
cgcgccgatgttgccgcgcgctggctcgagggtgcgggcggcgttgccgatccggcgatg
cgttccgaactggccgcagctgcgctcggcgtgatcgccgacccggacttcgccgagctg
ttcggaccggaggcgctggccgaggcaccgatcgcggcggtggtggcgggcgggcatgtc
gtgtcgggcaccgccgaccggctgctggtgaccgatgacggcgtgctggtggtcgatttc
aagactggccgtcgcgcgcccgcgacgctcgacgatgtgccgccctatcatctgcgccag
atggccgcctatgtcgccgcgctggaagtcgtctttcccggaagacaggtggtcgcgggc
ctgctctacactgccggaccggtgctctatgcgttgcccgacgcgctgctcgccacgcac
aagcccggcttcgcggcggcggagcaaagcttgatctga
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