Spirosoma linguale: Slin_0474
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Entry
Slin_0474 CDS
T01156
Name
(GenBank) peptidoglycan-binding lysin domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Slin_0474
Enzymes [BR:
sli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Slin_0474
Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Slin_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
DUF538
Motif
Other DBs
NCBI-GeneID:
8724202
NCBI-ProteinID:
ADB36538
UniProt:
D2QF61
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Position
588324..590729
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AA seq
801 aa
AA seq
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MNRLTPSLTFFFALVSLIASAQSLSIPVVPEQVTFADISVRLDPDARRIVQQDVNALFAN
KQYWTAKLDRVVLYFPMIESILIDEDVPTDFKYLAVQESSLTPDAVSSSTAVGYWQFKRE
TAIDNGMRVDEEIDERKSITSSTHGAAKYLKKSNTQFNNWVASLYSYYLGAGGISKLIPP
DWSYAREVALDGRTDRYILRFFAHKVAIENALRSHQTSNRFALIEYPNGGGKSMKAIAEE
LGVDEFELRKYNRWVLGEGVPTDKEYVVAIPVASDQINDIRQKIVNVGPKKTPVFVQNDV
GFPVLRRVTTGLSSKNDPILYEINGLPGIQAQVGDNPGTLARKAKISLSSFLRYNDMGDL
DQVIVNDVYYLAKKRKKALVPFHTVREDETTRSISQRYGIRLKKLLRYNRLDRVQKLAVG
RVMWLRERRPSNKPVEIINSPTPPVYDRTPTPPARQDVASSGGAARPVTGSDGVPRNASE
RKLYQPKLVGGGVTPNDGTSEPAVPQQSEPQRPSIQPANNGNQPVSSGRPVVTTPPPARV
DNSDGSQRVVIVRTPEGPEPTRAIPVATTPEREKTAGTPVVTTPKPTQTYAAKPSSKPAP
VADVDMGRPETGKYEGPREQQADGSLTVPGAVSPTKAPPRPAPPVVTKTETRPTAAEKVN
TEPKEVASSTRSAGAGSVNRSASTHTVEAGQTYYSISKLYGLTVDELLSLNNLTVDNKLE
VGQKLALKSIPGGRLVQPSATDKSSSATESSSGVTYHTVAKGETMFRISQIYGVTVEQIQ
LWNKLTDVGVKVGQKIKILKP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaatagactgaccccttccttaacttttttcttcgctctggtaagtctgatcgcatca
gcgcagtctttatcgattccggttgtgccggagcaggtgacgtttgccgatatttcggta
cgcctggaccccgatgcccgccgtatcgtgcaacaggatgtgaacgccctgtttgccaat
aagcaatactggactgctaaacttgatcgggtggtgctgtactttccgatgatcgagtcg
attctgattgacgaagacgttcctacagactttaaatacctcgctgttcaggagagttca
ctaacgccagatgccgtctcgtcgtccacagccgtgggctactggcagtttaaacgcgaa
acagccatcgataatggtatgcgggtagatgaggagatagacgaacgcaaaagcattaca
agctctacccacggtgccgccaaatacctcaaaaaaagtaacacccaatttaacaactgg
gtggcatccctctactcgtactatctgggtgctggcggcatttcaaaactgattccgccc
gactggtcttacgcccgtgaggtagctctggatggacgcacagatcggtacattctgcgt
tttttcgcccataaagtagccatcgaaaatgcgctgaggtcgcaccagaccagcaaccga
ttcgcgcttattgagtacccaaacgggggcggtaagtcgatgaaagccattgccgaagaa
ctgggcgtcgacgaatttgaactgcgtaaatacaaccgctgggtattgggcgaaggtgtg
ccaaccgacaaagagtacgtggtggccataccggtagccagcgatcagatcaatgacatc
cgtcagaagattgtcaatgtagggcccaaaaagacaccggtatttgttcagaacgatgtt
ggctttccggttttacgtcgggtgacaacgggccttagcagcaaaaacgaccctattctg
tacgaaataaacgggttgccgggtattcaggcgcaggttggcgacaaccccggaacgctt
gcccgaaaagctaaaattagtctgtcgagttttctgcggtacaacgacatgggcgacctg
gaccaggtcatcgtcaacgatgtatattatttggctaaaaagcgtaaaaaagcgctcgtc
ccctttcatactgttcgcgaagacgaaacgacgcgcagtatttctcagcgttacgggatt
cgtttgaaaaaactgctacgctataaccggctcgatcgtgtgcaaaaactagcggtaggt
cgggtgatgtggctccgtgaacgtcggccatccaataagcctgtcgagataatcaattcg
cccacaccacccgtttacgaccgcacaccaaccccaccagcgcggcaggatgtggcgtca
tcgggtggtgccgcccggcctgttacgggtagcgacggggtgccccgcaacgcatcggaa
cgcaaactataccagcccaaattagtgggtggcggagtgacgccgaatgacggcacatcc
gaaccggccgttcctcaacaatcggaaccccaacggccgtctattcaaccagccaataac
ggtaaccaaccagtgtcttccggccgccctgtggttactacccccccaccagcacgcgtc
gataacagtgatggctcacaacgggtcgttattgtcagaacgccggaagggccggagcct
accagggctataccggtagcgactacgcccgagcgggaaaaaaccgccggtacacccgtt
gtaacaacgccgaaaccaacgcagacctatgcggccaagcccagttcaaaacctgcacca
gtggccgatgtcgatatgggacgtccggaaaccggtaaatacgaaggccctcgtgaacag
caggccgatggttcattgacggtgccgggagccgtatccccaacgaaagcgccccctcgc
ccggcgcccccggttgttacgaaaacggaaacacgcccaacggcagcagaaaaagtcaac
actgagccaaaggaggtcgcatcgtcgacacgttcagcaggggcggggtctgtaaaccgg
tcggctagtacgcataccgtagaagctggacagacctattacagtatttcgaaactgtat
gggctgacggttgatgaactgctctcactcaacaacctgacggtagataataaactggaa
gttggccagaagttagcactaaaaagcattcccggcggtcggttagtacagccatcggca
acggataaatcgtcatcagcaactgagtcgtcgtcgggtgtaacgtaccataccgtcgcg
aagggagaaacgatgttccgtatttcgcagatttacggggtaaccgttgagcaaatacaa
ttgtggaataaactaacggatgtaggcgtgaaagtggggcagaagatcaagatcctgaag
ccctga
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