KEGG   Spirosoma linguale: Slin_0474
Entry
Slin_0474         CDS       T01156                                 
Name
(GenBank) peptidoglycan-binding lysin domain-containing protein
  KO
K08307  peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
Organism
sli  Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:sli00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sli01011]
    Slin_0474
Enzymes [BR:sli01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.29  peptidoglycan lytic transglycosylase
     Slin_0474
Peptidoglycan biosynthesis and degradation proteins [BR:sli01011]
 Peptidoglycan biosynthesis and degradation
  Lytic transglycosylase
   Slin_0474
SSDB
Motif
Pfam: LysM SLT DUF538
Other DBs
NCBI-GeneID: 8724202
NCBI-ProteinID: ADB36538
UniProt: D2QF61
LinkDB
Position
588324..590729
AA seq 801 aa
MNRLTPSLTFFFALVSLIASAQSLSIPVVPEQVTFADISVRLDPDARRIVQQDVNALFAN
KQYWTAKLDRVVLYFPMIESILIDEDVPTDFKYLAVQESSLTPDAVSSSTAVGYWQFKRE
TAIDNGMRVDEEIDERKSITSSTHGAAKYLKKSNTQFNNWVASLYSYYLGAGGISKLIPP
DWSYAREVALDGRTDRYILRFFAHKVAIENALRSHQTSNRFALIEYPNGGGKSMKAIAEE
LGVDEFELRKYNRWVLGEGVPTDKEYVVAIPVASDQINDIRQKIVNVGPKKTPVFVQNDV
GFPVLRRVTTGLSSKNDPILYEINGLPGIQAQVGDNPGTLARKAKISLSSFLRYNDMGDL
DQVIVNDVYYLAKKRKKALVPFHTVREDETTRSISQRYGIRLKKLLRYNRLDRVQKLAVG
RVMWLRERRPSNKPVEIINSPTPPVYDRTPTPPARQDVASSGGAARPVTGSDGVPRNASE
RKLYQPKLVGGGVTPNDGTSEPAVPQQSEPQRPSIQPANNGNQPVSSGRPVVTTPPPARV
DNSDGSQRVVIVRTPEGPEPTRAIPVATTPEREKTAGTPVVTTPKPTQTYAAKPSSKPAP
VADVDMGRPETGKYEGPREQQADGSLTVPGAVSPTKAPPRPAPPVVTKTETRPTAAEKVN
TEPKEVASSTRSAGAGSVNRSASTHTVEAGQTYYSISKLYGLTVDELLSLNNLTVDNKLE
VGQKLALKSIPGGRLVQPSATDKSSSATESSSGVTYHTVAKGETMFRISQIYGVTVEQIQ
LWNKLTDVGVKVGQKIKILKP
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaatagactgaccccttccttaacttttttcttcgctctggtaagtctgatcgcatca
gcgcagtctttatcgattccggttgtgccggagcaggtgacgtttgccgatatttcggta
cgcctggaccccgatgcccgccgtatcgtgcaacaggatgtgaacgccctgtttgccaat
aagcaatactggactgctaaacttgatcgggtggtgctgtactttccgatgatcgagtcg
attctgattgacgaagacgttcctacagactttaaatacctcgctgttcaggagagttca
ctaacgccagatgccgtctcgtcgtccacagccgtgggctactggcagtttaaacgcgaa
acagccatcgataatggtatgcgggtagatgaggagatagacgaacgcaaaagcattaca
agctctacccacggtgccgccaaatacctcaaaaaaagtaacacccaatttaacaactgg
gtggcatccctctactcgtactatctgggtgctggcggcatttcaaaactgattccgccc
gactggtcttacgcccgtgaggtagctctggatggacgcacagatcggtacattctgcgt
tttttcgcccataaagtagccatcgaaaatgcgctgaggtcgcaccagaccagcaaccga
ttcgcgcttattgagtacccaaacgggggcggtaagtcgatgaaagccattgccgaagaa
ctgggcgtcgacgaatttgaactgcgtaaatacaaccgctgggtattgggcgaaggtgtg
ccaaccgacaaagagtacgtggtggccataccggtagccagcgatcagatcaatgacatc
cgtcagaagattgtcaatgtagggcccaaaaagacaccggtatttgttcagaacgatgtt
ggctttccggttttacgtcgggtgacaacgggccttagcagcaaaaacgaccctattctg
tacgaaataaacgggttgccgggtattcaggcgcaggttggcgacaaccccggaacgctt
gcccgaaaagctaaaattagtctgtcgagttttctgcggtacaacgacatgggcgacctg
gaccaggtcatcgtcaacgatgtatattatttggctaaaaagcgtaaaaaagcgctcgtc
ccctttcatactgttcgcgaagacgaaacgacgcgcagtatttctcagcgttacgggatt
cgtttgaaaaaactgctacgctataaccggctcgatcgtgtgcaaaaactagcggtaggt
cgggtgatgtggctccgtgaacgtcggccatccaataagcctgtcgagataatcaattcg
cccacaccacccgtttacgaccgcacaccaaccccaccagcgcggcaggatgtggcgtca
tcgggtggtgccgcccggcctgttacgggtagcgacggggtgccccgcaacgcatcggaa
cgcaaactataccagcccaaattagtgggtggcggagtgacgccgaatgacggcacatcc
gaaccggccgttcctcaacaatcggaaccccaacggccgtctattcaaccagccaataac
ggtaaccaaccagtgtcttccggccgccctgtggttactacccccccaccagcacgcgtc
gataacagtgatggctcacaacgggtcgttattgtcagaacgccggaagggccggagcct
accagggctataccggtagcgactacgcccgagcgggaaaaaaccgccggtacacccgtt
gtaacaacgccgaaaccaacgcagacctatgcggccaagcccagttcaaaacctgcacca
gtggccgatgtcgatatgggacgtccggaaaccggtaaatacgaaggccctcgtgaacag
caggccgatggttcattgacggtgccgggagccgtatccccaacgaaagcgccccctcgc
ccggcgcccccggttgttacgaaaacggaaacacgcccaacggcagcagaaaaagtcaac
actgagccaaaggaggtcgcatcgtcgacacgttcagcaggggcggggtctgtaaaccgg
tcggctagtacgcataccgtagaagctggacagacctattacagtatttcgaaactgtat
gggctgacggttgatgaactgctctcactcaacaacctgacggtagataataaactggaa
gttggccagaagttagcactaaaaagcattcccggcggtcggttagtacagccatcggca
acggataaatcgtcatcagcaactgagtcgtcgtcgggtgtaacgtaccataccgtcgcg
aagggagaaacgatgttccgtatttcgcagatttacggggtaaccgttgagcaaatacaa
ttgtggaataaactaacggatgtaggcgtgaaagtggggcagaagatcaagatcctgaag
ccctga

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