Spirosoma linguale: Slin_0554
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Entry
Slin_0554 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_0554
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_0554
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Glyco_hydro_38N
Motif
Other DBs
NCBI-GeneID:
8724282
NCBI-ProteinID:
ADB36618
UniProt:
D2QFE1
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Position
684362..686110
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AA seq
582 aa
AA seq
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MYTPFAMNRLYNVCVLLGLMLVSVACTENLLDQIPTTQLSAELFWKTTADATAAVNGVYE
ANRTTFDRDYYFDGAGEFVNTRGTSNNQGTFNPSGLGSNGNFGFLWGDCYRAINRANYVL
GNIGTLRSTLNQPADLALMDRLVAETRFLRAINYFRLIDLWGDVPYFTRKLDGNAEAYGL
SRTPRAVVKDSILADLSFAATILPEVYAGDNLGRASRLAALAFSGKVNLFWASWMKNEGN
SAEAQKHFAAAAADFKKIVDKNIPLFRNGEPGPSDNPNYWHLFQYFNEYDPEIIFSVQFG
GPLLSQGEELSRDFGNRNTGFGQCWVAPTFRLANRYQLVSTGDFAPPLVLSRTTTLLNSA
TNPKSYEGRDYRMRATMVWDGQKMVQLSTDGLTVLPDSLPFRFGNRDGVTALNYDGQTSG
YMFRKWVRQTGGIGRSDGPQDIYLMRLPDVWLMYAEAVNEVNGGPTPELFTLLNRIRRRG
NLPALNTAKFSTQAEFFKAIEQERIIELVGEGQRFFDIRRWKKAEEIWPAPSGQVLFDTQ
GTRVRDEFVNADLRAYQRYYIFQIPPAEIEVNAKITQNAPWL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtataccccctttgccatgaatcgactttataacgtatgtgtgctgctggggctgatg
ctggtgtcagtggcttgtaccgagaatttactcgaccagatccccacgacgcaactgtcg
gcagaactgttctggaagacaacggccgatgccacggcggctgttaacggcgtctatgaa
gccaaccggactaccttcgaccgggattactatttcgacggggccggtgaatttgtcaat
acccgtgggaccagcaacaaccagggcacatttaaccccagtggtctgggctccaacggt
aattttggatttctgtggggcgattgttaccgggctatcaaccgcgccaactatgtgctg
ggcaatattggtaccctgcgatcgacgctcaaccagcccgccgatctggccctgatggat
cggctggtggccgaaacccgctttctgcgtgccatcaactacttccgactgatcgacctg
tggggcgatgtgccttactttaccagaaaactggacggtaatgccgaagcgtatggcctt
tcccgaacgccccgcgccgttgttaaggattctatcctggccgacctgagttttgcggca
acgattctacccgaagtttatgcgggcgacaatctgggtcgggcctcccggctggcggct
ctggctttcagcggtaaagtgaacctgttctgggccagctggatgaaaaacgaaggtaac
agcgccgaagcacagaagcattttgcggcagcagcggctgacttcaaaaagattgtcgac
aaaaatattccgctgtttcgtaatggtgagccggggccgtccgataatcccaactactgg
catctgtttcagtacttcaacgagtatgaccccgaaatcattttttccgtacagtttggc
gggccgctgctgagccagggcgaggaactgtcgcgcgatttcggtaaccgaaataccggt
ttcggtcagtgctgggttgcgcccacgttccgcttagccaaccggtatcaactggtgagc
accggcgatttcgcgcccccactcgtactgagccgcaccacgacgctgctcaacagcgcc
accaacccaaaatcgtacgaaggacgcgactaccggatgcgggccacaatggtgtgggac
ggccagaaaatggtgcagctgtcgaccgacggcttaacggtactgcccgatagcctgccc
ttccgctttggtaaccgcgacggggtaacggcccttaactatgacggacaaacgtccggc
tacatgtttcgcaaatgggtgcgacagacgggcggtatcggccggagcgatggcccgcag
gacatctacctgatgcgcctgcccgatgtgtggctcatgtatgccgaggctgttaacgaa
gtcaacggcggccccacgcccgaactcttcaccctgctgaaccgcattcgtcgcaggggt
aacctgcctgccctcaacacggcgaagttttcgacccaggccgaatttttcaaagccatc
gagcaggagcggatcattgaactggtgggcgaagggcagcgcttcttcgacattcgtcgc
tggaaaaaggccgaagaaatctggcccgctccatccgggcaggtgctcttcgacacccag
ggcacccgcgtccgcgatgagtttgtcaatgccgatctgcgcgcctaccagcggtattat
atttttcagattccgcccgccgagatcgaagtaaatgccaaaataacccaaaacgcaccc
tggttataa
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