Spirosoma linguale: Slin_4500
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Entry
Slin_4500 CDS
T01156
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Slin_4500
Enzymes [BR:
sli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Slin_4500
Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Slin_4500
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
Motif
Other DBs
NCBI-GeneID:
8728264
NCBI-ProteinID:
ADB40480
UniProt:
D2QMR7
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All DBs
Position
5454578..5456149
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AA seq
523 aa
AA seq
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MNYLNRGLLTFGLMSAVLAGLTTGARAKTPIQLDSTIVKKDTIALVPTVPDSLLRGRLAK
LQKSIPLNYHKAVQAYVDYFTFRKASTTKTMLERMPLFFPLYERVLAQYGLPDEFKYLSI
VESALNPRAISRAGAGGLWQIMPGTGRDLRLYQDDYVDERMDPVKATEAACKYLRDLYNI
FGDWELAMAAYNCGPNAVKRAMRRSGGDSFYTIYDALPKETRGYVPQFVAFTYLMNYASD
HGIVAEKYEYPIPHDTIQVSGYFNLETFAKHSSMALADLQKMNPAITTTILPEYTNHYPL
RVPREQYGYFASRRRAILDSASRRPNVMEHSLLASAEDVRYGTDTMGAWNELGRNPLARI
SLGEPLTDRVNDEARLANAESADEPEEDIETVVLRKPKKQTYVVRKGDNLLQIANRYNVE
LYDLKRWNHLRSTSIRRGQKLVILKEVAETRAERLADQGTAKSRKKAEVLAKSKHYKPRY
HRVQSGDTLWNIVQRYDLTIDQLKRMNHIRSNSLRPGQKLIVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctgaaccgtggcctgctgacattcgggctaatgagtgcggtgctggctggc
ctgacaacaggagcacgcgccaaaactccgattcaactggacagtacaatcgtcaaaaaa
gacactattgcgctcgtaccaacggtgcccgacagtttgttacgtgggcggctggcgaag
ctgcaaaaatctattccattgaattaccacaaggccgtacaggcttatgtggactacttc
acgttccgcaaagccagcactaccaagacaatgctggaacgtatgccccttttctttccg
ctctatgagcgcgtgctggctcagtacggtctccccgatgaattcaaatacctgtcaatt
gtcgagtcggcgctgaatccacgggctatttcgagagcaggtgccgggggcctctggcag
attatgcccggcaccggccgcgatttacggctgtatcaggacgattatgtcgatgagcgc
atggaccccgttaaagcaacggaagccgcctgtaaatacctgcgcgatctgtataatatc
tttggcgactgggagctggcgatggccgcctataactgtggcccaaatgcggtcaaacgt
gctatgcgccggtcggggggcgattccttctatacaatttacgatgcactgccgaaagaa
acccgcggctatgtaccgcagtttgtcgcgtttacctacctgatgaattacgccagtgat
cacggtattgtagccgaaaagtatgaataccccattcctcacgataccattcaggtgagt
ggctacttcaacctcgaaacgtttgccaaacacagcagtatggcattggccgatctgcaa
aaaatgaatccggccatcacaacaaccattttaccggaatacacaaaccattacccgctc
cgggtgcctcgggaacagtacggctattttgccagtcgcagacgagccattctggactca
gcgagccgacgcccaaatgttatggagcatagtttgctggcaagtgctgaagatgttcgg
tatggcaccgatacaatgggtgcctggaatgaactaggccgaaacccactggcacgtatc
agtctgggagaaccgctgacagaccgggtaaacgatgaggcaagactcgcgaatgccgaa
tcggccgatgagcccgaagaagatatcgaaacggtggtgttgcgtaagcctaaaaagcaa
acctacgttgtcagaaaaggcgataacttattgcaaattgccaaccggtacaacgtcgaa
ctttacgatctaaagcgctggaaccatttacggtctaccagtatccggcggggacaaaaa
ctggttatcctgaaagaggttgccgaaacccgtgctgagcgactcgccgatcagggaacc
gctaaaagccgtaaaaaagctgaagtactggcaaagtcgaagcattacaaaccccgctac
caccgcgtacaaagtggtgatacgctctggaacatcgttcagcggtacgacctaaccatc
gaccagcttaaacgaatgaaccacatccggagtaattcattacggcccggtcaaaaactg
atagtagggtag
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