Staphylococcus lugdunensis N920143: SLUG_16470
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Entry
SLUG_16470 CDS
T01951
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sln
Staphylococcus lugdunensis N920143
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sln03032
]
SLUG_16470 (topA)
03400 DNA repair and recombination proteins [BR:
sln03400
]
SLUG_16470 (topA)
Enzymes [BR:
sln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SLUG_16470 (topA)
DNA replication proteins [BR:
sln03032
]
Prokaryotic type
DNA Topoisomerases
SLUG_16470 (topA)
DNA repair and recombination proteins [BR:
sln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLUG_16470 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Toprim_2
Cys_rich_CPXG
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CCB54138
LinkDB
All DBs
Position
complement(1732813..1734870)
Genome browser
AA seq
685 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVDDNFEPKYITIRGK
GPVVKELKKHAKKAKKVFLASDPDREGEAIAWHLSNILELEDSKENRVVFNEITKDAVKE
SFKHPRDIEMDLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWTIEGEFRYQKSKFTAKFLHYKNKPFKLQNKDDVNKITAKLDGDQFEITN
VNKKEKTRNPAQPFTTSTLQQEAARKLNFKARKTMMIAQQLYEGIDLKRQGTVGLITYMR
TDSTRISDAAKNEAKSYITENYGSNYVSKRQAKGKQGDQDAHEAIRPTSAMRTPNEMKSY
LSRDQHRLYKLIWERFVASQMAPAILDTVALDVTQNDIKFRANGQTIKFKGFMTLYVEAK
DDKENKLPNLKEGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDT
IQKRNYVKLDSKRFVPTELGEIVYEQVKEYFPEIIDVEFTVNMETLLDKIAEGDMKWRKV
IDDFYNSFKLDVARAEKEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFPDCR
NTKAIVKTIGVTCPTCKKGDVVERKSKKNRIFYGCSNYPECDFISWDKPIGRDCPKCEHY
LVEKKKGRSSQVVCSNCDYQEEAQK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatttagtcattgttgaatcgcctgcaaaagcaaaaaccattgaaaaatat
ctaggtaaaaaatataaagttatcgcttcaatgggacacgtacgtgacttaccacgtagc
caaatgggcgtggatgttgatgataactttgaaccgaaatatataacgatacgcggtaaa
gggccggtagtaaaggaattaaagaaacatgcgaaaaaagctaaaaaggtttttcttgct
agtgaccccgaccgtgaaggtgaagcgattgcttggcatttatcaaacatattagaactt
gaagattcaaaagaaaatagagtcgtatttaatgaaattacaaaagatgcggtgaaagaa
agctttaaacatccacgagatattgaaatggatttagttgatgcgcaacaagcacgacgt
attttagatcgacttgtaggatataacatttcacctgtattgtggaaaaaggtaaaaaaa
ggattgtcagcagggcgtgtacagtctgttgctttaagattagtcatagaccgtgaaaat
gaaattcgcaatttcaaaccagaagaatattggacaattgaaggtgaatttagatatcaa
aaatccaaattcacggctaaatttttacattataaaaataaaccatttaaattacaaaac
aaagatgacgttaataaaataactgctaaattagatggtgaccagtttgaaataacaaat
gtgaataaaaaggaaaaaactagaaatccagcacaaccttttacaacttcaacattgcaa
caagaagcagcgcgtaaattaaatttcaaagcgcgtaaaacaatgatgattgcacaacaa
ttatatgaaggtatagatttaaaacggcaaggtactgttggtttaatcacatatatgcgt
acagattctactagaatatcagacgctgctaaaaatgaagctaaatcatatattacagag
aattatggcagcaattatgtatctaagcgtcaagccaaaggtaaacagggggaccaagat
gcccatgaagcaattcgtcctacaagtgcaatgcgtacgcctaatgaaatgaaatcatat
ttatcaagagatcaacatcgtttgtacaaattaatttgggaacgttttgttgcaagccaa
atggccccagcgatacttgataccgttgccttagatgtaacgcaaaatgacattaaattt
agagcgaacggtcaaacgattaaatttaaaggctttatgacattatacgtagaagcaaaa
gacgataaagaaaataaattgccaaatcttaaagaaggagataaagttactgcaactcaa
atagagccagcacaacactttactcaaccacctccacgttataccgaagctagattagtc
aaaacgttagaagaattaaaaattggtcgaccttcaacatatgcgccaacaatagataca
atccaaaaacgtaactatgtcaaattagatagtaagcgttttgtgcctacagaattaggt
gaaattgtctatgaacaagtgaaagaatacttccctgaaatcattgatgttgaatttaca
gttaatatggaaacattattagacaaaattgcggaaggcgatatgaagtggcgcaaggtt
attgatgacttttataatagttttaaactagatgtcgctagagcagaaaaagaaatggaa
aaaatagaaattaaagatgaacctgctggcgaggattgtgaagtatgtgggtctccaatg
gtcattaaaatggggcgttatggcaaatttatggcatgttctaattttccagattgccgt
aacactaaagcgattgttaaaacaattggtgttacatgtccaacttgtaaaaaaggcgat
gttgttgaaagaaaatctaagaaaaatcgcatattttatggttgttctaattatccagaa
tgtgattttatttcatgggataaaccaattggaagagactgtccaaaatgtgagcattat
ttagtagagaagaaaaaaggacgcagtagtcaagtagtttgttctaattgtgattatcaa
gaagaagctcaaaaatag
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