Shewanella loihica: Shew_0882
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Entry
Shew_0882 CDS
T00489
Name
(GenBank) Organic solvent tolerance protein
KO
K04744
LPS-assembly protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_0882
Transporters [BR:
slo02000
]
Other transporters
Pores ion channels [TC:
1
]
Shew_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
Motif
Other DBs
NCBI-ProteinID:
ABO22754
UniProt:
A3QBA6
LinkDB
All DBs
Position
complement(1001547..1003868)
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AA seq
773 aa
AA seq
DB search
MHIRYLLALALLPQLVLADESETTPAPGAQCLVLPPVPIPEPSADERPLDLQQIKIVSDS
SAAKMGDKASFQGDVTFSQGGRHIAADSAVLDQANERLDANGNLVFQDNMFTVTADSLSA
EMRSNSAQLKGAQYWLHGQQIHGEAENLEITQDNNLHLSNTNFTTCPPGDSSWLLEAETI
KIDSSEEWGELWDAKLKIGDVPVFYLPYMTIPVSEKRKSGFLFPYFSTSTTNGVEVATPY
YWNIAPEYDLTFTPHYMSARGLFLKSEFRYLAGEAQQGQLNVEYLSNDDLVPNRADRYLY
HWEHQGAIADNWRVLANFTDVSDNNYFNDLPSDVLRATDNQLSRIGEIAYFEDNWDMSAR
VQDIKVLGEEESPYQVMPQIGFNYRAPGFWQGLDFNLMGEASNFRHKEDQYATASRLHFE
PSVSLPIHGPAGSLTSELKLLQTNYWQDTKNYTGTQPLDSSVSRTLPQVRIHGQINFERF
TDYFDANYRQTLEPQFQYLYVGYEDQSNIGIYDTALLQEDYYGLFRDRRFSGLDRIADAN
QMTLGLTTRLFDDHNLERFKFSLGQIYYFEDSKVGITDPSRPNEIFKQENTSNSVLAAEL
NTQLYSDWFLSGAIQYDTKNRNNKKSEVTLDFRPGVNKLLQLSYRYVPDLVNSNTNESVN
VSQTGLRTAWPINDNWYIVGNWYYDLNEKRSVETYTGFQYESCCWAVRLSYHYRIKTNYV
DNLDPTFNDRELFESGFYLNFVIKGLGGSGPLGVSDMLNDGLFNYRKPLYLKN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcatatccgttacttattggcattggcgctactcccgcagctagtcttggcagacgaa
tcggaaaccactcccgcgcccggtgcccagtgtctggtgctcccgcctgttcccattcct
gagcccagcgcagacgaacgtcccctagatctgcagcagattaagatcgtttccgactca
tcggcagctaagatgggtgacaaggccagtttccagggagatgtgacattcagccagggc
ggacgccatatcgccgccgacagcgcggtactggatcaggctaacgagcgcctagatgcc
aacggcaacctggtgttccaggacaatatgtttaccgtcacggccgactctctcagcgcc
gagatgcgcagcaacagcgcccaacttaagggtgcccaatattggctccacggtcagcag
atccacggcgaagcggaaaacctggagatcacccaggacaacaacctgcacctgtcgaac
accaacttcacgacctgtccgccgggcgatagctcatggctgctggaagccgagaccatc
aagatagacagcagcgaagagtggggcgagctttgggatgccaagctcaagataggcgat
gtgcccgtcttctatctgccctacatgacaattcccgtgtcggagaagcgtaagtcaggc
ttcctgttcccctatttcagcaccagcaccaccaatggtgtcgaggtagcgaccccctac
tactggaacatagcgccagagtatgatctcacctttactccgcactatatgtcggcccgc
ggactgttcctcaagtcggaatttcgctatctcgccggtgaggcccagcaggggcagctg
aatgtggaatacctgagcaatgacgatctggtgcccaaccgcgccgaccgttacctctac
cactgggagcatcagggggccatcgccgacaactggcgggtactggccaactttaccgat
gtgtcggacaacaactacttcaacgatctgccctcagacgtgctgcgcgccaccgacaac
cagctctctcgcataggcgaaatcgcctatttcgaagataactgggacatgtctgccaga
gtgcaggatatcaaggtattgggtgaagaagagtctccctatcaggtgatgccgcagata
ggctttaactatcgcgccccaggtttctggcaaggcttggacttcaatctcatgggagaa
gccagcaacttccgccataaggaagatcaatatgctaccgccagccgtctgcacttcgag
cccagtgtctcactaccgatccacgggccggccggatcgctgaccagtgagcttaagctt
ctgcagaccaactactggcaggacaccaagaactacactggcactcagccgctggacagc
tcggtgagccgtaccctgccccaggtgcgtatccacggtcagataaacttcgagcgtttc
accgactacttcgatgccaactatcgtcagactctggagccacagttccagtatctgtat
gtcggctatgaggatcagtccaacatcggcatctatgacacagcgctgctgcaggaagac
tactacggcctcttcagggatcgccgcttctcgggtctggaccgtatcgccgacgccaac
cagatgacactgggtttaacgacccgtctgtttgacgaccataacctcgagcgcttcaag
ttcagcctgggtcagatctactacttcgaggacagcaaggttggcattacagatccttcc
cgtcccaacgagatctttaagcaggaaaatacctcaaactcagtgctggcagcagagctc
aacactcagctctacagcgattggttcttaagcggtgccattcaatatgacaccaaaaac
aggaacaacaagaagagtgaggtcaccctggatttccgccccggggtcaacaagctgttg
cagctcagctaccgttatgtgcccgatttagttaacagcaacaccaacgaatctgttaat
gtgtcgcaaaccggcttgcgtacggcttggccgatcaacgacaactggtatatcgtgggc
aactggtattacgatctcaatgagaaacgtagcgtcgagacctacacaggatttcaatac
gaatcttgttgctgggcggtgcgcttaagttatcattaccgcattaaaaccaactatgtt
gacaacctggatcccacgttcaacgacagggagctgttcgaaagcggcttctacctgaac
tttgtgatcaagggattagggggttccggcccgcttggggtatcggacatgcttaacgat
ggcctgtttaactatcgcaagccgctctacctgaaaaactag
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