Shewanella loihica: Shew_1221
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Entry
Shew_1221 CDS
T00489
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
slo
Shewanella loihica
Pathway
slo00362
Benzoate degradation
slo00620
Pyruvate metabolism
slo00650
Butanoate metabolism
slo01100
Metabolic pathways
slo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Shew_1221
00650 Butanoate metabolism
Shew_1221
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shew_1221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1221
Enzymes [BR:
slo01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Shew_1221
Transporters [BR:
slo02000
]
Other transporters
Primary active transporters [TC:
3
]
Shew_1221
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
ABO23091
UniProt:
A3QC93
LinkDB
All DBs
Position
1419368..1420501
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AA seq
377 aa
AA seq
DB search
MDGLIAFWAESGIANFTGGQLLMMAVGALLLYLAIARGFEPLLLLPIGFGAILANIPNGG
FTEEGGMLYYAYHVGIETGVFPLLIFMGVGALTDFGALIANPKMLLLGAAAQFGIFATLI
GAIALNAVPGFEFSMKDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPI
IQPPIMKLLTTEAERQIKMEQLREVSKLEKIIFPLAVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSADKFLQLETLGILVLGAVAFGIGTA
AGVLMAKLMSKLSGGKINPLIGAAGVSAVPMAARVVNKVGLQANQQNFLLMHAMGPNVAG
VLGSAVAAGVLLAVLGG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggacggattaatcgccttttgggccgagtcgggtattgctaactttaccggcggccag
ttgttgatgatggcagtgggggcgctcttgctctatctcgccatcgccagaggtttcgag
ccgttgctgctcttgcctatcggttttggcgccatattggccaacatccccaacgggggc
ttcaccgaagagggcggcatgctctattacgcctaccatgtggggatcgaaaccggggtc
tttcccctgttgatcttcatgggggtcggggccctgaccgattttggtgcccttatcgcc
aaccctaagatgctgttgctgggggcggctgcgcagttcgggatctttgccaccctaatc
ggtgccatcgcccttaacgccgtgccgggcttcgagttctccatgaaggatgcggcggcc
atcgccatcattggcggcgccgatggcccgacggccatcttcctcgcctccaagctggcg
cctgagctgctcggtgccatcgcagtcgcggcctactcttatatggcgctggtgcccatc
attcagccgcctatcatgaagctgctgaccactgaggctgagcgtcagatcaagatggag
caactgcgtgaggtgagtaagcttgagaagatcatcttcccgctggcagtgctggggctg
accattctcttcctgccggcggcgacgcctctggtgggcatgttctgtctgggcaacctg
atgcgtgaatctggcgtggtcgatagactctccaacacggcgcaaaatgagctgatcaac
atagtgaccatcttcttgggcctggcggtaggctccaagctctcggccgataagttcctg
cagctggaaaccttaggcatcctggtgctgggggccgtggccttcggtatcggcaccgcg
gctggcgtgctgatggctaagctgatgagcaagctgtctggcggtaagatcaatccgctg
atcggcgccgccggcgtctcggccgtacctatggccgcccgtgtggtcaacaaggtgggt
ctgcaggccaatcagcaaaacttcctcttgatgcacgccatggggccaaacgtggccggc
gtgctgggctctgcggtcgcagccggtgtcttgctggcggtactgggtggctag
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