Shewanella loihica: Shew_2666
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Entry
Shew_2666 CDS
T00489
Name
(GenBank) omega-3 polyunsaturated fatty acid synthase PfaB
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MethyTransf_Reg
P22_AR_C
Motif
Other DBs
NCBI-ProteinID:
ABO24532
UniProt:
A3QGD4
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Position
3148073..3150223
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AA seq
716 aa
AA seq
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MTQEFGQKVSNANANSEGATPLRVALLLLPKDAPLPDTLANQPVRKLHVDQIEPKLTEAE
LTENKLAQTLEQAVSWVATGDLVCLHGAQQTLLLMPALKAAQHKLHPHAHLAALQYGQSQ
GSALQGALAQAKRQPDSVQCRAHIDDMNKGFDALCRLIADIAQRTIRRSESRRHYWFTEP
YQGRVATLTLENTQPQQGKAQTHLAMVLTQGTGRLKARSLLSASQLFFLLPGSSEAALNQ
GLWALAAALDKLALSQTEPLAREMAIIELMQQNLDAFATSGPTRFVICLQAISIEALGQE
ITAMSQALAKVCKEKGEYRTPSGSYFSAAPLGQAKLAFVYPGVGTIYPDMLHELHSYFPA
LFSRLQQQGDLKAMLQADMIYQEDKADTQQMPLSKMAIAGVGASYLLTKLLVDEFAVQPH
FALGYSMGEAAMWASLDVWQDPHSLIDKTLSEPLFTEEISGPLKAVRRHWQLSDKDPLEW
NSFLVRCQGDDIQPLLERYPRVYLAITQGDTCVIAGCQASCQALLQELGKRGIAANRVTA
MHTPPALSLQSQVQAFYHQAIMAEAAEHPVKFISAASLIDGQDGAVNEIQALSAEAIATS
IAKTFCHHLDFESLIQSATHQGAALFVEVGADRQNCTLIDKILKASETPHVSVPVNARGA
NEVITLLKALGTLISHRVPVSLTVLQLGLKRELAKLQQRSAQGEPPLANTLFQEEV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaggagtttggccaaaaggtaagcaatgctaacgctaacagcgaaggcgctacc
ccgctgcgggtagccctcttgctgttgccaaaagatgcgcccttgcccgataccttagcc
aatcagccagttcgaaagctgcatgttgaccaaattgagcctaagttaaccgaggctgag
cttactgagaataagctggctcagacgcttgagcaggcagtgagctgggtcgccacaggc
gatctggtttgcctgcatggcgcccagcaaacattgctgctgatgccagcgctcaaggcg
gcgcagcacaagctgcaccctcatgcccatctggcggcgctacaatacggtcaaagccag
ggcagtgcactgcaaggcgcgctggcacaggccaaacgccaaccggatagtgttcaatgc
agagcgcatatcgatgacatgaacaagggcttcgacgccttgtgtcgcctgatcgctgat
attgcacagcgaaccattaggcgttcagagagccggcgtcactactggtttaccgagccc
tatcagggacgagtggcgacgcttaccctggagaatacccagcctcagcaagggaaagcg
caaactcatctggccatggtgctgacacaaggcacaggccgactcaaggcgcgttcgcta
ctgtcggccagccagctgttctttctgctacccggtagcagtgaagccgcgctcaaccaa
gggctctgggccctggcggcggccttggataagctcgccttatcacagaccgagccctta
gcgcgggagatggcgatcattgagctgatgcagcaaaatctcgatgcctttgccaccagc
ggcccgacacgttttgtcatctgtctacaggccataagtatcgaggcgcttgggcaggag
atcaccgccatgagccaggcgctggccaaagtctgtaaggagaaaggggaataccgcacg
ccatcgggtagctatttcagcgccgcgccgctgggtcaggccaagctggccttcgtttat
cccggcgttggcaccatctaccctgatatgctgcatgagctacatagctactttccggcc
ctgtttagccgcttgcagcaacaaggggatctcaaggcgatgctgcaggccgatatgatc
tatcaagaagataaggccgacactcagcagatgcctctaagcaagatggccattgccggt
gtgggcgccagctacctgctgaccaagctcttggtggatgaatttgcagtgcagccgcac
tttgccctgggttactccatgggtgaagccgccatgtgggccagcctggatgtgtggcaa
gatccccatagcttgatcgataagaccctgagcgagcccctgtttaccgaggagatctca
ggtccgctcaaggcggttcgtcgtcactggcaactgtcagacaaggatcctctcgaatgg
aacagttttctggtgcgatgccaaggcgatgatattcagcctttgctggagcgttacccc
agagtctatcttgccatcacccagggggatacctgcgtgatcgctggctgtcaggccagt
tgccaggccctgttacaggaactgggtaaacgtggcatagccgccaaccgcgtcaccgcc
atgcatacgccaccagccttaagcctgcagtcgcaggtgcaggccttctatcatcaggcg
atcatggccgaggccgccgagcatccggtcaaatttatcagcgccgccagcctcatcgat
ggccaagatggcgccgtcaacgaaattcaggccctgagcgccgaagctatcgctacctcg
atagccaagaccttctgtcatcacctcgattttgagtcgctcatccagagcgcaacccat
cagggggctgcgctatttgtcgaggtcggtgccgacagacaaaactgcaccctgatagat
aaaattctaaaagccagcgagacacctcatgtcagcgtgccggtcaatgcccgcggcgca
aacgaggtgatcaccctgctcaaagccttgggcacactgatcagccacagagttcccgtc
agcctcactgtgctgcaactgggactcaagcgtgaactggctaagctacaacagcgcagc
gctcaaggtgagcctccgctcgccaataccctatttcaagaggaagtctaa
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