Shewanella loihica: Shew_3218
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Entry
Shew_3218 CDS
T00489
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
Organism
slo
Shewanella loihica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Carboxyl_trans
ATP-grasp
Biotin_lipoyl
Dala_Dala_lig_C
DUF2529
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ABO25084
UniProt:
A3QHY6
LinkDB
All DBs
Position
complement(3837701..3842251)
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AA seq
1516 aa
AA seq
DB search
MTSNNQPTNTTQVQTADPLFLQAEHLAQDFSLFPKHSKQSLSQQIKGLLSDDEIQANLKE
LEQLDVDGYVAKVIQPTLDKSRPGAKRVIADLKGKLIVEKHMGPFYSAEIELNFGSRTRR
IGFIAQERSTSNGAWMPEHHLAACTAIRHFAELSMPIVYLIDTPGADAGEIANSQNQAHT
ISKAIAESANVDVPTVGIVIGAGYSGGAIPLAAANILLSLRDGIFNTIQPQGLQSIARKY
NLSWQECAKSVGVSPEELYTSGCIDGIIDFSPSDKDERQHNLRRAIISSIEAVEHAAVQF
VRESKDLREHYDRSLHRFLEPSKNLEALEHHAELSVANNPTMHLNLFGSSYRYLRYLTLR
SRIHSISQEQYGRLSKVSVPEGDLLARIQQEQDKVFQSWLSSPDKLVYDEELNKLWSNFT
AKRDEVSTERNMLTRLILGEPKQNYKKARKALLFNIGWSLYHRWKSNAENNFKGLIHYLE
SLPDEVTQADWPELNQLTVLDVIVHEELREDFIWQCYNILIFNALYDNVVGNLASIAKEA
MMSKSLSRASVDGLLHDSIDRAISKQDTANDKNKFYKWLKYFMSQSNRADLLTKTEQWKS
VGFPQLNDSLFVILTYFFERLLPEYFASEEESSEYTGAINPVRIGRRKDFWNRLTMGYQD
LLIQKVLRDEKRAGKMSWENVIAKFFTEFEELNGDKMSANLLNFPGFRLSIEDALDKGIR
PCGLITGTADFEHHGQTMRVGVAVSNTAFQAGAFDMASAEKFSALLIECAKRKLPVICFI
SSGGMQTKEGAAALFSMAVVNDRITRFVRDNELPVLMFGFGDCTGGAQASFVTHPLVQTY
YFSGTNMPFAGQMVVPAYLPSTSTLSNYLSKVPGAMNALVTNPFSDTIDDQLSSIDPLMP
KPTAKVVDVIGNAISTLVPEMLITEEELVQDDPRQLMKPIDKVLVHARGCTAVKLIRKAH
DNNIKVVLVASDPDMTSVPADMLNENDKLVCIGGNTSDESYLNAYSVLKVAEYEQVDALH
PGIGFLSESPQFAALCVNNGVNFVGPSVHSMTTMGNKSNAIKTSQSQNVPVVPGSHGILT
NAEQAVNVANEIGYPVLLKAVQGGGGKGIQVVQRPEDMISLFQKTSTEAAAAFGNGDLYL
EKYVTSLRHIEVQLLRDKFGNTKVLGLRDCSVQRNNQKVIEESGSTMLPEELKQQVMEYT
RALGDATDYMGAGTVEFIYNLDANEVYFMEMNTRLQVEHPVTEATSGIDIVSAGFDIAAG
RSIEDLEPQEIGYAIEVRVTAEKAALDSNGVLQLLPHPGMITECVIPERDDIEIISIAGE
GKEVSPYYDSLIAQIICRGESREDVINKLHDYLANQVVIKGIATNIPLLTRILKDGTFNE
GVYDTNYLPRFMAELDIPALIAEMEAAAETVGVDTESLRVGESNELKVLAQGAGIFYTSP
APGEADFVKEGDIVTVDQTLALTEAMKMFSQVTLAGFNRQGAVLYPEDKQYRIERILNSN
GQQVSQGELLFVVSPV
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaacaatcagcccacaaacacgactcaggttcaaacagccgatccgcttttt
cttcaagctgaacatttggcacaggatttttctctgtttcctaagcatagtaagcagagc
ctttcacagcagatcaagggtctgctcagcgacgatgaaattcaagctaacttaaaagag
ttagaacagttggatgttgacggctacgtggccaaagtcattcaacctaccttagacaag
agccgcccaggcgccaagcgcgtgattgcggatctgaaaggcaagttaattgtcgaaaaa
catatggggcctttttatagtgccgagatcgaactgaattttggatctcgtactcgccgc
ataggttttatcgcccaggaacgtagcacaagtaatggtgcctggatgccagagcatcac
ctggcggcctgcacggccattcgtcattttgccgagctttcaatgcctatcgtttacctc
atcgacactccgggtgccgatgcgggggagatagccaacagccaaaaccaggcgcacacc
atctctaaggcgattgccgagagtgctaacgtcgacgtacctaccgtaggtatcgttatc
ggtgccggttactctggtggtgctattccactggctgcggctaacattctattgtcgcta
cgtgacggtatcttcaacaccatccagccacagggtctacagagcattgcgcgtaagtac
aacctctcttggcaggagtgtgctaagtcggtaggtgtgtcaccagaggagctgtacacc
tcaggttgtatcgatggcatcatcgacttctcgccatctgacaaggatgagcgtcagcac
aacctacgccgcgctatcatcagcagcatcgaggccgttgagcatgcggcggtacagttt
gtacgcgaatctaaggatctgcgtgagcactacgaccgcagtcttcaccgtttccttgag
ccttctaagaacctcgaagcgcttgagcaccacgccgaactgtcggtggctaacaacccc
accatgcacctcaacctgtttggtagctcataccgttacctgcgttacctgacgctgcgt
agccgtatccattcgatctcacaggagcaatatggtcgcctgtctaaggtgagtgtgcct
gagggtgatctgttggcgcgtattcagcaggaacaggacaaggtgttccagtcttggctg
tcgagcccagataaactggtatacgacgaagagctgaacaagctgtggagcaacttcacc
gccaagcgtgacgaagtctctacagagcgtaacatgctgactcgtctcatcctgggtgag
ccgaagcaaaactataagaaggcccgtaaggcgctgttgttcaacatcggctggtcgctg
taccacagatggaagagcaacgccgagaacaacttcaaggggctaatccattatctagag
agccttccagacgaggtgactcaggcagattggcctgagctgaaccagctgacggttctg
gatgtgatcgtgcacgaagagctgcgcgaagacttcatctggcaatgttataacatcctg
atcttcaacgcgctgtacgacaacgtcgtgggtaaccttgcctctatcgcgaaagaagcc
atgatgtctaagagcctgtcgcgcgcctcggttgacggcctgctacatgactctattgac
cgcgctatctctaagcaagataccgctaacgataagaacaagttctacaagtggctgaag
tacttcatgtctcagtctaaccgcgccgatctgctgaccaagactgagcagtggaagagt
gtcggtttccctcagcttaacgactctctgttcgttatcctgacctacttcttcgagcgt
ctgctgcctgaatacttcgccagcgaagaggagagcagcgagtacacgggtgccatcaac
ccagtgcgtatcggtcgtcgtaaagacttctggaaccgtctgaccatgggttatcaggat
cttctgatccagaaggtactgcgtgacgagaagcgcgccggtaagatgagctgggaaaat
gtgattgccaagttcttcaccgagtttgaagagctaaacggcgacaagatgtcggctaac
ctgctgaacttcccaggcttccgtctctctatcgaagacgcgctagacaagggtatccgt
ccttgcggcctgatcacaggtactgcggacttcgagcaccatggacaaaccatgcgcgtt
ggtgtggccgtgtctaacaccgccttccaggctggtgccttcgatatggcttctgccgag
aagttctcagcgctcttgatcgagtgtgccaagcgtaagctgccggtgatctgctttatc
agctcaggcggtatgcagaccaaagaaggtgctgcggcgctcttctctatggcggtagtg
aacgaccgtattacccgtttcgttcgtgataacgaattgccggtattgatgtttggtttc
ggtgactgtaccggtggtgcacaggcgagcttcgtgactcacccgttagtacagacttac
tacttctctggcaccaacatgccgttcgccggtcagatggttgtccctgcgtatctgccg
tctacctcgaccctgtcgaactatctgtctaaggtacctggcgccatgaacgccctggtc
accaacccatttagcgacactatcgacgatcagctcagcagtatcgatccgctgatgcct
aagccaacggctaaggtagtggatgtgattggtaacgccatttcgaccctggtgcctgag
atgttgatcaccgaggaagagctggtacaggacgatccacgtcagctgatgaagccgatc
gataaggtactggtgcacgcccgtggctgtactgcggtgaaactgatccgcaaggcacac
gacaacaacatcaaggtggtactggtggcgtcagatcctgacatgacctcagtaccggcc
gacatgctgaacgaaaacgacaagctggtctgtatcggtggtaacacctcagacgagagt
tacctaaacgcctactcggtattgaaggttgccgaatatgagcaagtcgacgcgctgcac
cctggtatcggcttcctgtcggaaagcccgcagtttgcggccctgtgtgtgaacaacggc
gttaacttcgtcggtccaagtgtgcactcaatgacgactatgggtaacaagtcgaacgcg
attaagacctcgcagtcgcaaaatgtgccagtagtacctggcagccacggtattctgacc
aatgccgagcaggcggtgaacgtggccaacgaaatcggctaccctgtgctgcttaaggcg
gtacaaggtggtggcggtaagggtatccaggtcgttcaacgtccagaagatatgatctct
ctgttccagaagacctctaccgaagcggctgcggccttcggtaacggcgacctctaccta
gagaagtatgtgacctcactgcgtcacatcgaagtgcagctgctgcgtgacaagtttggc
aacaccaaggtactgggtttgcgtgactgttcggtacagcgtaacaaccagaaggtgatc
gaagagtctggttctaccatgctgccagaagagctgaagcagcaggtgatggaatacacc
cgcgccctcggtgacgccacagactacatgggcgcaggtaccgtagagttcatctacaac
ctggatgccaacgaagtctacttcatggagatgaacacgcgtctgcaggttgaacaccct
gtgaccgaggcgacctcaggtatcgatatcgtgagcgcaggcttcgacatcgccgccggt
cgttcaatagaagatcttgagccacaagagatcggctacgccatcgaggttcgtgtgact
gccgagaaggccgcactggacagcaacggcgtactgcaactgctgccacatccaggcatg
atcaccgagtgtgtgatcccagagcgtgacgatatcgagatcatctctatcgccggtgaa
ggcaaagaggtttcaccatactacgacagcctgatcgctcagatcatctgccgtggtgag
agccgtgaggatgtgatcaacaagctgcatgactacctggcaaaccaagtagtgatcaag
ggcatcgcgaccaacatcccactgctgactcgtatcctgaaagatggcaccttcaacgaa
ggcgtatacgacaccaactacctgccacgcttcatggctgagctggatattccagcgctg
atcgccgagatggaagccgccgcagagactgtaggcgtcgataccgagtcgctgcgtgtg
ggtgagagtaacgagcttaaggttctggctcagggtgcaggtatcttctatacctctcca
gcgccgggtgaagccgacttcgttaaggaaggcgacatagtgactgtggatcagacactg
gcgttgaccgaagcgatgaagatgttctctcaggtgacactggctggcttcaaccgtcag
ggtgccgtgctctatccagaggataagcagtaccgcatcgagcgtatcctgaacagcaat
ggtcagcaggtttcacagggcgagctactcttcgtggtctctcctgtctaa
DBGET
integrated database retrieval system
