Shewanella loihica: Shew_3356
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Entry
Shew_3356 CDS
T00489
Name
(GenBank) heavy metal efflux pump, CzcA family
KO
K15726
heavy metal efflux system protein
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_3356
Transporters [BR:
slo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shew_3356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6249
Motif
Other DBs
NCBI-ProteinID:
ABO25222
UniProt:
A3QIC4
LinkDB
All DBs
Position
complement(4003102..4006332)
Genome browser
AA seq
1076 aa
AA seq
DB search
MLQKLIDSAIRNRLLVALALLCGVVASVAMLPKLNLDAFPDVTNVQVTVNTAAEGLAAEE
VEKLISYPVESAMYALPSVTEVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAAREM
IPDGVGVPEIGPNTSGLGQIYQYILRATPESGIDAAELRSLNDYLVKLIMMPVGGVTDVL
SFGGEVRQYQVQIEPNKLRSYGLSMAQVTQALESNNRNAGGWFMDQGQEQLVVRGYGLLP
AGEAGLAAIAQIPLTEAGGTPVRVADIAKVDFGAEIRVGAVTMTRRDDAGTPKALGEVVA
GVVLKRMGANTKATIDDISARTAMIEQALPKGVSFEVFYDQADLVNKAVETVRDALLMAF
LFIVVILALFLVNLRATLLVLLSIPVSIGLALMVMAYFGMSANLMSLGGLAVAIGMLVDG
SVVMVENIFKHLTQPDRRHFDQAKARASGESDPYHGEEDGLGEGERSGIALRVMLAAKEV
CSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAVSIILAMVAALFVALIGVPALAVYLFK
RGVTLRESPVLKPVEALYRHLLSATMGRPKLVLLTAVTLFGISMALLPRLGTEFVPELEE
GTINLRVTLAPTASLSTSLDVAPKLEAMLMTFPEVDYALSRIGAPELGGDPEPVSNIEIY
IGLKPIEEWEHAETRLELQRKMEEKLSVFPGLLFTFSQPIATRVDELLSGVKAQLAIKLF
GPDLEVLSSKGQELSELVSGIEGAVDVSLEQVSGEAQLVVRPKRDLLARYGISVDEVMSL
VSQGIGGVSAGQVIDGNARYDINVRLASQYRSAPDALEDLLLSGVNGATVRLGEVADVVV
EMAPPNIRRDDVQRRVVVQANVSGRDMGSVVKDIYAIVPQADLPPGYTVVVGGQYENQQR
AQQKLMLVVPISIALIALLLYFSFGSIKQVGLIMANVPLALIGGVVALYVSGTYLSVPSS
IGFITLFGVAVLNGVVLVDSINQRRASGEALYTSVYEGTVGRLRPVLMTALTSALGLIPI
LLSSGVGSEIQKPLAVVIIGGLFSSTALTLLVLPTLYRWLYETKALKGDKELEALD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagaaacttatcgatagcgcgatacgcaatcggcttctggtggccctggcgctg
ctgtgtggtgtggtagccagtgtcgccatgttacctaagctcaatctcgatgcctttccc
gatgtcaccaatgtgcaggtgacggtcaataccgccgccgaggggctagcggccgaggag
gtggaaaagctgatcagctacccggtggagtcggccatgtacgccctgccatcggtgacc
gaggtgcgctccttgtcacgcaccggcctctccatagtgactgtggtgtttgccgaaggc
acagatatctactttgcccgtcagcaggtattcgagcagctgcaggccgccagggagatg
atccctgacggggtgggggtgcccgagataggccccaacacctcaggcctgggacagatc
tatcagtacatattgcgggccacgcctgagtccggtatagatgccgccgagctaaggagc
ctcaacgactatctggtgaagctcatcatgatgccggtggggggcgtgaccgacgtgctc
tctttcggcggcgaggtgcgtcaatatcaggtgcagatagagcctaacaagctgcgcagc
tatggcctctccatggcccaggtgactcaggcgctggagagcaacaaccgcaacgcaggt
ggctggtttatggaccagggacaggagcagctggtggtacgtggctacggcctgttaccg
gcgggtgaggctggcctggcggcgatcgcccagatcccactcacagaggcaggcggtacg
ccggtgcgggtggccgacattgccaaggtggactttggcgccgagatccgtgtgggcgcg
gtcaccatgacccgccgcgacgatgctggaacgccaaaggcgctaggcgaagtggtcgcc
ggcgtggtgctcaagcgtatgggggccaacaccaaggcgaccatcgacgatatctcggcc
cgcaccgccatgatagagcaggccctgcccaagggcgtctccttcgaggtgttctacgat
caggcggatctggtgaacaaggcggtagagacggtgcgcgatgccctcttgatggccttc
ctgtttatcgtggttatcctggcgctcttcctggtgaacctgcgcgcgactttgttggtg
ctgctctctatcccagtctccatcggcctggccttgatggtgatggcttactttggcatg
tcggccaacctgatgtccctgggtgggctggcggtggctatcggcatgctggtggatggc
tcagtggtgatggtggagaacatcttcaaacatctgacccagccggacagacgccatttc
gatcaggccaaggcccgcgcctcgggtgagtctgacccctaccacggcgaggaagatggc
ctgggagaaggagagcgcagcggcatcgccctgagggtgatgctggcggccaaggaggtg
tgcagcccgatcttcttcgccaccgccatcatcatagtggtgtttgcgccgctgtttgcc
ctggaaggggtagagggcaagctgttccagcccatggcggtgagcatcattctggccatg
gtggcggcgctgtttgtggccctgatcggcgtgccagctttagctgtctatctgttcaag
cgcggcgtgaccctgagggagagtccggtactcaagccggttgaggccctgtatcgtcac
ctgcttagtgccaccatgggcaggcccaagttggtgctgctgacggcggtgaccctgttc
ggcatcagcatggcgctgctgccaaggctaggtaccgagtttgtgcccgagctcgaggag
ggcaccattaacctgagggtgaccctggcgccaaccgccagcctgagcacctcattggat
gtggcgcccaagctcgaggccatgttgatgactttccccgaggtcgactatgccctgagc
cgtattggtgccccggaacttggcggcgatcctgagcctgtgagcaacatagagatctat
atcggccttaagccgatcgaggagtgggaacacgccgagacccgtctcgagctgcagcgc
aagatggaagagaagcttagcgtcttccccggcctgctatttaccttctcccagcccatc
gccacccgtgtcgatgagttgctttcaggggtgaaggcccagctggcgatcaagctgttt
ggcccggatctcgaggtgctctccagcaaggggcaggagctcagcgagctggtgtcgggt
atcgagggggcggtcgatgtctccctggagcaggtgtccggcgaggcccagctggtggtg
cgtcccaagcgcgatctgctggcccgctatggcatcagcgtcgatgaggtgatgagcctg
gtgagtcagggcataggcggtgtcagcgccgggcaggtgatcgacggcaacgctagatac
gacatcaatgtgcgtctggccagccaatatcgcagcgcgcccgatgcgctggaggatctg
ctgctcagcggcgtaaacggtgcgaccgtgcgtctaggcgaggtggccgatgtggtggtc
gagatggcgccgcctaatatccgccgtgacgatgtgcaacgccgggtggtggtgcaggcc
aacgtgtcggggcgcgacatgggctcagtggtgaaggatatctacgccatagtgcctcag
gcggatctgccgccgggttatacggtcgtggtcggcggtcagtatgagaaccagcagcgg
gctcagcagaagctgatgttggtggtgcccatctccatcgccctgatcgccctgctgctc
tacttctcttttggctccattaagcaggtgggcctgatcatggccaacgtgccgctggcg
ctgatcggcggcgtggtggccctctatgtcagcggcacctatctgtctgtgcctagctcc
atcggctttatcaccctgttcggggtggcagtgctcaatggtgtggtgttggtggactcg
atcaaccagaggcgcgcctcgggagaagccctctacaccagcgtgtatgaaggcactgtg
ggacgcctgcgccccgtgctgatgacggcgttgacctcggcgctgggtttgatcccaata
ctcctgtctagcggtgtgggcagcgagatccaaaagccgctggcggtggtgatcataggc
ggcctgtttagctctaccgccctgacgctgctggtgttgccgaccctgtatcgctggctc
tatgagaccaaggcgcttaaaggggacaaggagttggaagccctagactag
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